Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00909

Experiment: 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00908 and MPMX20_00909 are separated by 41 nucleotidesMPMX20_00909 and MPMX20_00910 are separated by 108 nucleotides MPMX20_00908: MPMX20_00908 - Glutathione hydrolase-like YwrD proenzyme, at 955,499 to 957,100 _00908 MPMX20_00909: MPMX20_00909 - Omega-amidase YafV, at 957,142 to 957,912 _00909 MPMX20_00910: MPMX20_00910 - Acyl-coenzyme A dehydrogenase, at 958,021 to 960,465 _00910 Position (kb) 957 958Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 956.191 kb on + strand, within MPMX20_00908at 956.217 kb on + strand, within MPMX20_00908at 956.217 kb on + strand, within MPMX20_00908at 956.217 kb on + strand, within MPMX20_00908at 956.220 kb on - strand, within MPMX20_00908at 956.225 kb on - strand, within MPMX20_00908at 956.225 kb on - strand, within MPMX20_00908at 956.250 kb on + strand, within MPMX20_00908at 956.296 kb on + strand, within MPMX20_00908at 956.310 kb on + strand, within MPMX20_00908at 956.313 kb on - strand, within MPMX20_00908at 956.318 kb on - strand, within MPMX20_00908at 956.318 kb on - strand, within MPMX20_00908at 956.385 kb on + strand, within MPMX20_00908at 956.437 kb on - strand, within MPMX20_00908at 956.444 kb on + strand, within MPMX20_00908at 956.452 kb on - strand, within MPMX20_00908at 956.495 kb on + strand, within MPMX20_00908at 956.542 kb on - strand, within MPMX20_00908at 956.557 kb on - strand, within MPMX20_00908at 956.570 kb on - strand, within MPMX20_00908at 956.589 kb on + strand, within MPMX20_00908at 956.589 kb on + strand, within MPMX20_00908at 956.589 kb on + strand, within MPMX20_00908at 956.589 kb on + strand, within MPMX20_00908at 956.589 kb on + strand, within MPMX20_00908at 956.589 kb on + strand, within MPMX20_00908at 956.597 kb on - strand, within MPMX20_00908at 956.597 kb on - strand, within MPMX20_00908at 956.897 kb on + strand, within MPMX20_00908at 956.897 kb on + strand, within MPMX20_00908at 956.897 kb on + strand, within MPMX20_00908at 956.905 kb on - strand, within MPMX20_00908at 956.905 kb on - strand, within MPMX20_00908at 956.910 kb on - strand, within MPMX20_00908at 956.977 kb on - strandat 957.044 kb on + strandat 957.112 kb on + strandat 957.112 kb on + strandat 957.112 kb on + strandat 957.120 kb on - strandat 957.120 kb on - strandat 957.120 kb on - strandat 957.120 kb on - strandat 957.139 kb on + strandat 957.152 kb on - strandat 957.173 kb on - strandat 957.293 kb on - strand, within MPMX20_00909at 957.419 kb on - strand, within MPMX20_00909at 957.425 kb on + strand, within MPMX20_00909at 957.433 kb on - strand, within MPMX20_00909at 957.512 kb on - strand, within MPMX20_00909at 957.821 kb on - strand, within MPMX20_00909at 957.857 kb on - strandat 957.871 kb on + strandat 957.906 kb on - strandat 957.931 kb on - strandat 957.946 kb on + strandat 957.954 kb on - strandat 958.056 kb on + strandat 958.070 kb on + strandat 958.101 kb on + strandat 958.101 kb on + strandat 958.101 kb on + strandat 958.101 kb on + strandat 958.101 kb on + strandat 958.109 kb on - strandat 958.109 kb on - strandat 958.109 kb on - strandat 958.182 kb on - strandat 958.322 kb on + strand, within MPMX20_00910at 958.469 kb on - strand, within MPMX20_00910at 958.501 kb on + strand, within MPMX20_00910at 958.596 kb on - strand, within MPMX20_00910at 958.611 kb on - strand, within MPMX20_00910at 958.640 kb on + strand, within MPMX20_00910at 958.643 kb on + strand, within MPMX20_00910at 958.673 kb on - strand, within MPMX20_00910at 958.763 kb on - strand, within MPMX20_00910at 958.767 kb on + strand, within MPMX20_00910at 958.808 kb on - strand, within MPMX20_00910at 958.808 kb on - strand, within MPMX20_00910at 958.815 kb on + strand, within MPMX20_00910at 958.816 kb on - strand, within MPMX20_00910at 958.823 kb on - strand, within MPMX20_00910at 958.849 kb on - strand, within MPMX20_00910at 958.879 kb on - strand, within MPMX20_00910at 958.882 kb on - strand, within MPMX20_00910

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1
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956,191 + MPMX20_00908 0.43 +1.3
956,217 + MPMX20_00908 0.45 -0.6
956,217 + MPMX20_00908 0.45 -2.0
956,217 + MPMX20_00908 0.45 +0.5
956,220 - MPMX20_00908 0.45 +1.4
956,225 - MPMX20_00908 0.45 +0.3
956,225 - MPMX20_00908 0.45 +1.4
956,250 + MPMX20_00908 0.47 +0.1
956,296 + MPMX20_00908 0.50 -0.2
956,310 + MPMX20_00908 0.51 +3.6
956,313 - MPMX20_00908 0.51 +2.4
956,318 - MPMX20_00908 0.51 +0.3
956,318 - MPMX20_00908 0.51 +0.4
956,385 + MPMX20_00908 0.55 +1.4
956,437 - MPMX20_00908 0.59 -0.0
956,444 + MPMX20_00908 0.59 +1.6
956,452 - MPMX20_00908 0.59 -1.2
956,495 + MPMX20_00908 0.62 +0.5
956,542 - MPMX20_00908 0.65 +1.0
956,557 - MPMX20_00908 0.66 -0.2
956,570 - MPMX20_00908 0.67 +3.0
956,589 + MPMX20_00908 0.68 -2.4
956,589 + MPMX20_00908 0.68 +1.1
956,589 + MPMX20_00908 0.68 +0.0
956,589 + MPMX20_00908 0.68 -1.1
956,589 + MPMX20_00908 0.68 -1.3
956,589 + MPMX20_00908 0.68 -0.1
956,597 - MPMX20_00908 0.69 +0.5
956,597 - MPMX20_00908 0.69 +0.6
956,897 + MPMX20_00908 0.87 -2.2
956,897 + MPMX20_00908 0.87 -0.2
956,897 + MPMX20_00908 0.87 -2.7
956,905 - MPMX20_00908 0.88 -0.4
956,905 - MPMX20_00908 0.88 -1.4
956,910 - MPMX20_00908 0.88 +0.1
956,977 - -0.5
957,044 + +0.4
957,112 + +0.6
957,112 + -0.2
957,112 + -0.4
957,120 - +0.2
957,120 - +1.4
957,120 - +0.3
957,120 - -0.3
957,139 + -1.3
957,152 - -0.3
957,173 - -1.2
957,293 - MPMX20_00909 0.20 -1.3
957,419 - MPMX20_00909 0.36 -0.8
957,425 + MPMX20_00909 0.37 -0.7
957,433 - MPMX20_00909 0.38 -1.7
957,512 - MPMX20_00909 0.48 -0.5
957,821 - MPMX20_00909 0.88 -1.0
957,857 - +3.6
957,871 + -1.4
957,906 - +4.3
957,931 - -0.2
957,946 + -0.4
957,954 - -0.9
958,056 + -1.0
958,070 + -1.1
958,101 + -1.1
958,101 + -0.3
958,101 + -0.6
958,101 + -0.5
958,101 + -1.5
958,109 - -0.8
958,109 - -0.8
958,109 - -1.4
958,182 - +1.8
958,322 + MPMX20_00910 0.12 +0.5
958,469 - MPMX20_00910 0.18 -1.1
958,501 + MPMX20_00910 0.20 +1.5
958,596 - MPMX20_00910 0.24 +0.2
958,611 - MPMX20_00910 0.24 +1.4
958,640 + MPMX20_00910 0.25 -1.1
958,643 + MPMX20_00910 0.25 -0.8
958,673 - MPMX20_00910 0.27 +0.3
958,763 - MPMX20_00910 0.30 -2.2
958,767 + MPMX20_00910 0.31 +2.2
958,808 - MPMX20_00910 0.32 -0.2
958,808 - MPMX20_00910 0.32 -2.9
958,815 + MPMX20_00910 0.32 +2.6
958,816 - MPMX20_00910 0.33 +0.7
958,823 - MPMX20_00910 0.33 -0.9
958,849 - MPMX20_00910 0.34 -0.3
958,879 - MPMX20_00910 0.35 +0.4
958,882 - MPMX20_00910 0.35 +0.9

Or see this region's nucleotide sequence