Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02694

Experiment: 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02692 and MPMX20_02693 are separated by 111 nucleotidesMPMX20_02693 and MPMX20_02694 are separated by 207 nucleotidesMPMX20_02694 and MPMX20_02695 are separated by 37 nucleotidesMPMX20_02695 and MPMX20_02696 are separated by 107 nucleotides MPMX20_02692: MPMX20_02692 - Ferrichrome outer membrane transporter/phage receptor, at 2,844,952 to 2,847,054 _02692 MPMX20_02693: MPMX20_02693 - hypothetical protein, at 2,847,166 to 2,847,420 _02693 MPMX20_02694: MPMX20_02694 - Flagellar brake protein YcgR, at 2,847,628 to 2,848,359 _02694 MPMX20_02695: MPMX20_02695 - Endo-type membrane-bound lytic murein transglycosylase A, at 2,848,397 to 2,849,008 _02695 MPMX20_02696: MPMX20_02696 - Murein tetrapeptide carboxypeptidase, at 2,849,116 to 2,850,030 _02696 Position (kb) 2847 2848 2849Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2846.632 kb on - strand, within MPMX20_02692at 2846.695 kb on + strand, within MPMX20_02692at 2846.703 kb on - strand, within MPMX20_02692at 2846.768 kb on - strand, within MPMX20_02692at 2846.864 kb on + strandat 2846.882 kb on + strandat 2846.882 kb on + strandat 2846.882 kb on + strandat 2846.890 kb on - strandat 2846.936 kb on + strandat 2846.944 kb on - strandat 2846.946 kb on + strandat 2846.946 kb on + strandat 2846.949 kb on - strandat 2846.949 kb on - strandat 2846.954 kb on - strandat 2846.954 kb on - strandat 2846.954 kb on - strandat 2846.954 kb on - strandat 2847.014 kb on + strandat 2847.014 kb on + strandat 2847.022 kb on - strandat 2847.164 kb on + strandat 2847.181 kb on - strandat 2847.225 kb on + strand, within MPMX20_02693at 2847.225 kb on + strand, within MPMX20_02693at 2847.325 kb on + strand, within MPMX20_02693at 2847.369 kb on - strand, within MPMX20_02693at 2847.423 kb on - strandat 2847.438 kb on + strandat 2847.438 kb on + strandat 2847.438 kb on + strandat 2847.438 kb on + strandat 2847.446 kb on - strandat 2847.446 kb on - strandat 2847.446 kb on - strandat 2847.461 kb on + strandat 2847.461 kb on - strandat 2847.528 kb on - strandat 2847.574 kb on + strandat 2847.582 kb on - strandat 2847.589 kb on + strandat 2847.597 kb on - strandat 2847.597 kb on - strandat 2847.597 kb on - strandat 2847.597 kb on - strandat 2847.603 kb on + strandat 2847.607 kb on - strandat 2847.608 kb on + strandat 2847.616 kb on + strandat 2847.681 kb on - strandat 2847.681 kb on - strandat 2847.840 kb on - strand, within MPMX20_02694at 2847.948 kb on + strand, within MPMX20_02694at 2847.948 kb on + strand, within MPMX20_02694at 2847.953 kb on + strand, within MPMX20_02694at 2847.956 kb on - strand, within MPMX20_02694at 2847.956 kb on - strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2848.001 kb on - strand, within MPMX20_02694at 2848.116 kb on + strand, within MPMX20_02694at 2848.116 kb on + strand, within MPMX20_02694at 2848.116 kb on + strand, within MPMX20_02694at 2848.149 kb on + strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.157 kb on - strand, within MPMX20_02694at 2848.196 kb on - strand, within MPMX20_02694at 2848.206 kb on + strand, within MPMX20_02694at 2848.213 kb on - strand, within MPMX20_02694at 2848.297 kb on - strandat 2848.336 kb on - strandat 2848.338 kb on - strandat 2848.338 kb on - strandat 2848.339 kb on - strandat 2848.389 kb on - strandat 2848.500 kb on + strand, within MPMX20_02695at 2848.542 kb on + strand, within MPMX20_02695at 2848.550 kb on - strand, within MPMX20_02695at 2848.600 kb on + strand, within MPMX20_02695at 2848.608 kb on - strand, within MPMX20_02695at 2848.730 kb on - strand, within MPMX20_02695at 2848.763 kb on - strand, within MPMX20_02695at 2848.765 kb on + strand, within MPMX20_02695at 2848.779 kb on - strand, within MPMX20_02695at 2848.865 kb on - strand, within MPMX20_02695at 2848.903 kb on - strand, within MPMX20_02695at 2848.958 kb on + strandat 2849.035 kb on + strandat 2849.070 kb on - strandat 2849.116 kb on - strandat 2849.145 kb on + strandat 2849.171 kb on - strandat 2849.301 kb on + strand, within MPMX20_02696at 2849.340 kb on + strand, within MPMX20_02696at 2849.357 kb on + strand, within MPMX20_02696

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4
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2,846,632 - MPMX20_02692 0.80 +0.3
2,846,695 + MPMX20_02692 0.83 +1.4
2,846,703 - MPMX20_02692 0.83 +0.0
2,846,768 - MPMX20_02692 0.86 +1.7
2,846,864 + -1.2
2,846,882 + -0.7
2,846,882 + +0.8
2,846,882 + +1.6
2,846,890 - +0.0
2,846,936 + -1.1
2,846,944 - -0.8
2,846,946 + -0.5
2,846,946 + -1.2
2,846,949 - +1.6
2,846,949 - +0.0
2,846,954 - -0.1
2,846,954 - -0.1
2,846,954 - +1.4
2,846,954 - +0.5
2,847,014 + +1.6
2,847,014 + +1.0
2,847,022 - -1.4
2,847,164 + +0.6
2,847,181 - -1.0
2,847,225 + MPMX20_02693 0.23 -2.1
2,847,225 + MPMX20_02693 0.23 -0.6
2,847,325 + MPMX20_02693 0.62 -1.3
2,847,369 - MPMX20_02693 0.80 -1.2
2,847,423 - -0.2
2,847,438 + -2.3
2,847,438 + -0.7
2,847,438 + -1.8
2,847,438 + -0.9
2,847,446 - -0.9
2,847,446 - +1.8
2,847,446 - -1.8
2,847,461 + +1.3
2,847,461 - -0.6
2,847,528 - -0.1
2,847,574 + -1.9
2,847,582 - -0.8
2,847,589 + -0.8
2,847,597 - +0.6
2,847,597 - -0.3
2,847,597 - +1.1
2,847,597 - +1.1
2,847,603 + +0.2
2,847,607 - +0.8
2,847,608 + -1.4
2,847,616 + -0.1
2,847,681 - +0.2
2,847,681 - -0.3
2,847,840 - MPMX20_02694 0.29 +1.1
2,847,948 + MPMX20_02694 0.44 +0.2
2,847,948 + MPMX20_02694 0.44 +3.1
2,847,953 + MPMX20_02694 0.44 -0.9
2,847,956 - MPMX20_02694 0.45 -1.6
2,847,956 - MPMX20_02694 0.45 -0.4
2,847,993 + MPMX20_02694 0.50 -1.7
2,847,993 + MPMX20_02694 0.50 +0.0
2,847,993 + MPMX20_02694 0.50 -0.1
2,847,993 + MPMX20_02694 0.50 -0.9
2,847,993 + MPMX20_02694 0.50 +0.4
2,848,001 - MPMX20_02694 0.51 +0.3
2,848,116 + MPMX20_02694 0.67 +2.6
2,848,116 + MPMX20_02694 0.67 -0.7
2,848,116 + MPMX20_02694 0.67 -1.3
2,848,149 + MPMX20_02694 0.71 +2.0
2,848,157 - MPMX20_02694 0.72 -0.7
2,848,157 - MPMX20_02694 0.72 +0.2
2,848,157 - MPMX20_02694 0.72 +0.5
2,848,157 - MPMX20_02694 0.72 +2.0
2,848,196 - MPMX20_02694 0.78 +2.1
2,848,206 + MPMX20_02694 0.79 +0.3
2,848,213 - MPMX20_02694 0.80 -0.3
2,848,297 - -2.5
2,848,336 - +1.1
2,848,338 - +2.6
2,848,338 - -1.2
2,848,339 - -0.5
2,848,389 - +0.8
2,848,500 + MPMX20_02695 0.17 -1.0
2,848,542 + MPMX20_02695 0.24 +1.8
2,848,550 - MPMX20_02695 0.25 -0.2
2,848,600 + MPMX20_02695 0.33 +0.6
2,848,608 - MPMX20_02695 0.34 +0.8
2,848,730 - MPMX20_02695 0.54 -0.7
2,848,763 - MPMX20_02695 0.60 -0.3
2,848,765 + MPMX20_02695 0.60 -0.3
2,848,779 - MPMX20_02695 0.62 -1.0
2,848,865 - MPMX20_02695 0.76 +1.7
2,848,903 - MPMX20_02695 0.83 -0.7
2,848,958 + +1.8
2,849,035 + +0.6
2,849,070 - -0.2
2,849,116 - -0.9
2,849,145 + -3.3
2,849,171 - -3.6
2,849,301 + MPMX20_02696 0.20 -1.7
2,849,340 + MPMX20_02696 0.24 -1.0
2,849,357 + MPMX20_02696 0.26 -2.3

Or see this region's nucleotide sequence