Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01507

Experiment: 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01505 and MPMX20_01506 are separated by 6 nucleotidesMPMX20_01506 and MPMX20_01507 are separated by 20 nucleotidesMPMX20_01507 and MPMX20_01508 are separated by 226 nucleotidesMPMX20_01508 and MPMX20_01509 are separated by 97 nucleotides MPMX20_01505: MPMX20_01505 - Arginine ABC transporter permease protein ArtQ, at 1,574,004 to 1,574,720 _01505 MPMX20_01506: MPMX20_01506 - Putative ABC transporter arginine-binding protein 2, at 1,574,727 to 1,575,458 _01506 MPMX20_01507: MPMX20_01507 - Arginine transport ATP-binding protein ArtP, at 1,575,479 to 1,576,207 _01507 MPMX20_01508: MPMX20_01508 - putative lipoprotein YbjP, at 1,576,434 to 1,576,952 _01508 MPMX20_01509: MPMX20_01509 - hypothetical protein, at 1,577,050 to 1,577,373 _01509 Position (kb) 1575 1576 1577Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1574.482 kb on - strand, within MPMX20_01505at 1574.512 kb on - strand, within MPMX20_01505at 1574.568 kb on + strand, within MPMX20_01505at 1574.573 kb on + strand, within MPMX20_01505at 1574.576 kb on - strand, within MPMX20_01505at 1574.578 kb on + strand, within MPMX20_01505at 1574.578 kb on + strand, within MPMX20_01505at 1574.581 kb on - strand, within MPMX20_01505at 1574.621 kb on + strand, within MPMX20_01505at 1574.690 kb on - strandat 1574.700 kb on - strandat 1574.705 kb on - strandat 1574.813 kb on + strand, within MPMX20_01506at 1574.813 kb on + strand, within MPMX20_01506at 1574.818 kb on + strand, within MPMX20_01506at 1574.821 kb on - strand, within MPMX20_01506at 1574.821 kb on - strand, within MPMX20_01506at 1574.821 kb on - strand, within MPMX20_01506at 1574.826 kb on - strand, within MPMX20_01506at 1574.826 kb on - strand, within MPMX20_01506at 1574.834 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.844 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.859 kb on - strand, within MPMX20_01506at 1574.890 kb on + strand, within MPMX20_01506at 1575.063 kb on - strand, within MPMX20_01506at 1575.082 kb on - strand, within MPMX20_01506at 1575.154 kb on + strand, within MPMX20_01506at 1575.154 kb on + strand, within MPMX20_01506at 1575.269 kb on + strand, within MPMX20_01506at 1575.277 kb on - strand, within MPMX20_01506at 1575.278 kb on - strand, within MPMX20_01506at 1575.297 kb on - strand, within MPMX20_01506at 1575.301 kb on + strand, within MPMX20_01506at 1575.372 kb on - strand, within MPMX20_01506at 1575.401 kb on - strandat 1575.401 kb on - strandat 1575.416 kb on + strandat 1575.416 kb on + strandat 1575.474 kb on - strandat 1575.538 kb on - strandat 1575.538 kb on - strandat 1575.777 kb on + strand, within MPMX20_01507at 1575.785 kb on - strand, within MPMX20_01507at 1575.810 kb on + strand, within MPMX20_01507at 1575.818 kb on - strand, within MPMX20_01507at 1575.818 kb on - strand, within MPMX20_01507at 1575.818 kb on - strand, within MPMX20_01507at 1575.825 kb on + strand, within MPMX20_01507at 1575.922 kb on - strand, within MPMX20_01507at 1575.922 kb on - strand, within MPMX20_01507at 1575.922 kb on - strand, within MPMX20_01507at 1575.932 kb on - strand, within MPMX20_01507at 1575.978 kb on - strand, within MPMX20_01507at 1576.023 kb on + strand, within MPMX20_01507at 1576.031 kb on - strand, within MPMX20_01507at 1576.041 kb on - strand, within MPMX20_01507at 1576.060 kb on + strand, within MPMX20_01507at 1576.060 kb on + strand, within MPMX20_01507at 1576.060 kb on + strand, within MPMX20_01507at 1576.068 kb on - strand, within MPMX20_01507at 1576.068 kb on - strand, within MPMX20_01507at 1576.068 kb on - strand, within MPMX20_01507at 1576.105 kb on - strand, within MPMX20_01507at 1576.157 kb on + strandat 1576.170 kb on - strandat 1576.195 kb on + strandat 1576.195 kb on + strandat 1576.195 kb on + strandat 1576.195 kb on + strandat 1576.203 kb on - strandat 1576.203 kb on - strandat 1576.203 kb on - strandat 1576.203 kb on - strandat 1576.215 kb on + strandat 1576.215 kb on + strandat 1576.215 kb on + strandat 1576.215 kb on + strandat 1576.223 kb on - strandat 1576.237 kb on - strandat 1576.513 kb on + strand, within MPMX20_01508at 1576.518 kb on + strand, within MPMX20_01508at 1576.518 kb on + strand, within MPMX20_01508at 1576.518 kb on + strand, within MPMX20_01508at 1576.518 kb on + strand, within MPMX20_01508at 1576.567 kb on + strand, within MPMX20_01508at 1576.589 kb on + strand, within MPMX20_01508at 1576.647 kb on + strand, within MPMX20_01508at 1576.655 kb on - strand, within MPMX20_01508at 1576.676 kb on + strand, within MPMX20_01508at 1576.681 kb on + strand, within MPMX20_01508at 1576.681 kb on + strand, within MPMX20_01508at 1576.689 kb on - strand, within MPMX20_01508at 1576.689 kb on - strand, within MPMX20_01508at 1576.701 kb on - strand, within MPMX20_01508at 1576.720 kb on + strand, within MPMX20_01508at 1576.782 kb on + strand, within MPMX20_01508at 1576.817 kb on - strand, within MPMX20_01508at 1576.893 kb on + strand, within MPMX20_01508at 1576.903 kb on + strandat 1576.940 kb on - strandat 1577.015 kb on - strandat 1577.022 kb on - strandat 1577.022 kb on - strandat 1577.022 kb on - strandat 1577.072 kb on + strandat 1577.072 kb on + strandat 1577.080 kb on - strandat 1577.087 kb on + strand, within MPMX20_01509at 1577.093 kb on - strand, within MPMX20_01509at 1577.100 kb on - strand, within MPMX20_01509at 1577.124 kb on - strand, within MPMX20_01509at 1577.130 kb on - strand, within MPMX20_01509at 1577.194 kb on - strand, within MPMX20_01509at 1577.206 kb on + strand, within MPMX20_01509

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4
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1,574,482 - MPMX20_01505 0.67 +0.0
1,574,512 - MPMX20_01505 0.71 -3.3
1,574,568 + MPMX20_01505 0.79 -0.2
1,574,573 + MPMX20_01505 0.79 -1.2
1,574,576 - MPMX20_01505 0.80 -1.1
1,574,578 + MPMX20_01505 0.80 -0.8
1,574,578 + MPMX20_01505 0.80 -0.6
1,574,581 - MPMX20_01505 0.80 -1.4
1,574,621 + MPMX20_01505 0.86 -0.7
1,574,690 - -0.9
1,574,700 - -0.0
1,574,705 - -0.6
1,574,813 + MPMX20_01506 0.12 +0.6
1,574,813 + MPMX20_01506 0.12 -0.0
1,574,818 + MPMX20_01506 0.12 +1.0
1,574,821 - MPMX20_01506 0.13 +0.1
1,574,821 - MPMX20_01506 0.13 -0.0
1,574,821 - MPMX20_01506 0.13 -0.8
1,574,826 - MPMX20_01506 0.14 +0.7
1,574,826 - MPMX20_01506 0.14 -0.4
1,574,834 + MPMX20_01506 0.15 -0.0
1,574,841 + MPMX20_01506 0.16 -2.0
1,574,841 + MPMX20_01506 0.16 +0.8
1,574,841 + MPMX20_01506 0.16 +0.3
1,574,841 + MPMX20_01506 0.16 +0.2
1,574,841 + MPMX20_01506 0.16 -1.4
1,574,841 + MPMX20_01506 0.16 -2.0
1,574,844 - MPMX20_01506 0.16 -1.5
1,574,849 - MPMX20_01506 0.17 -0.8
1,574,849 - MPMX20_01506 0.17 -1.8
1,574,849 - MPMX20_01506 0.17 -0.9
1,574,849 - MPMX20_01506 0.17 -0.3
1,574,849 - MPMX20_01506 0.17 +1.0
1,574,859 - MPMX20_01506 0.18 -0.1
1,574,890 + MPMX20_01506 0.22 +0.1
1,575,063 - MPMX20_01506 0.46 -1.8
1,575,082 - MPMX20_01506 0.48 -1.0
1,575,154 + MPMX20_01506 0.58 -0.6
1,575,154 + MPMX20_01506 0.58 -0.9
1,575,269 + MPMX20_01506 0.74 -0.6
1,575,277 - MPMX20_01506 0.75 -0.4
1,575,278 - MPMX20_01506 0.75 -1.5
1,575,297 - MPMX20_01506 0.78 -1.4
1,575,301 + MPMX20_01506 0.78 -1.0
1,575,372 - MPMX20_01506 0.88 -1.0
1,575,401 - -1.9
1,575,401 - -0.0
1,575,416 + +1.0
1,575,416 + +0.3
1,575,474 - +0.6
1,575,538 - -2.4
1,575,538 - -1.2
1,575,777 + MPMX20_01507 0.41 -0.9
1,575,785 - MPMX20_01507 0.42 +0.5
1,575,810 + MPMX20_01507 0.45 -2.3
1,575,818 - MPMX20_01507 0.47 -2.3
1,575,818 - MPMX20_01507 0.47 -0.7
1,575,818 - MPMX20_01507 0.47 -1.3
1,575,825 + MPMX20_01507 0.47 -0.3
1,575,922 - MPMX20_01507 0.61 -0.7
1,575,922 - MPMX20_01507 0.61 -2.1
1,575,922 - MPMX20_01507 0.61 -1.2
1,575,932 - MPMX20_01507 0.62 -0.5
1,575,978 - MPMX20_01507 0.68 -0.1
1,576,023 + MPMX20_01507 0.75 +1.9
1,576,031 - MPMX20_01507 0.76 -0.2
1,576,041 - MPMX20_01507 0.77 -0.4
1,576,060 + MPMX20_01507 0.80 -2.4
1,576,060 + MPMX20_01507 0.80 -2.2
1,576,060 + MPMX20_01507 0.80 -0.1
1,576,068 - MPMX20_01507 0.81 -0.9
1,576,068 - MPMX20_01507 0.81 +0.5
1,576,068 - MPMX20_01507 0.81 -1.4
1,576,105 - MPMX20_01507 0.86 -0.3
1,576,157 + -0.5
1,576,170 - -0.2
1,576,195 + +1.0
1,576,195 + -1.2
1,576,195 + -1.1
1,576,195 + +1.6
1,576,203 - -0.6
1,576,203 - -0.7
1,576,203 - -1.1
1,576,203 - +0.6
1,576,215 + -3.4
1,576,215 + +0.5
1,576,215 + -0.0
1,576,215 + -1.3
1,576,223 - -0.0
1,576,237 - -1.4
1,576,513 + MPMX20_01508 0.15 +0.6
1,576,518 + MPMX20_01508 0.16 -0.6
1,576,518 + MPMX20_01508 0.16 -3.3
1,576,518 + MPMX20_01508 0.16 +2.1
1,576,518 + MPMX20_01508 0.16 -0.6
1,576,567 + MPMX20_01508 0.26 -0.7
1,576,589 + MPMX20_01508 0.30 -0.4
1,576,647 + MPMX20_01508 0.41 -0.3
1,576,655 - MPMX20_01508 0.43 +0.1
1,576,676 + MPMX20_01508 0.47 +0.0
1,576,681 + MPMX20_01508 0.48 +2.6
1,576,681 + MPMX20_01508 0.48 -0.1
1,576,689 - MPMX20_01508 0.49 +1.6
1,576,689 - MPMX20_01508 0.49 -1.7
1,576,701 - MPMX20_01508 0.51 +2.7
1,576,720 + MPMX20_01508 0.55 +0.6
1,576,782 + MPMX20_01508 0.67 -1.0
1,576,817 - MPMX20_01508 0.74 -1.3
1,576,893 + MPMX20_01508 0.88 -1.4
1,576,903 + +1.6
1,576,940 - +3.3
1,577,015 - +0.7
1,577,022 - +0.3
1,577,022 - +0.0
1,577,022 - +1.4
1,577,072 + +1.1
1,577,072 + -0.0
1,577,080 - -0.5
1,577,087 + MPMX20_01509 0.11 -1.7
1,577,093 - MPMX20_01509 0.13 -2.1
1,577,100 - MPMX20_01509 0.15 +2.4
1,577,124 - MPMX20_01509 0.23 -1.7
1,577,130 - MPMX20_01509 0.25 -0.9
1,577,194 - MPMX20_01509 0.44 +1.6
1,577,206 + MPMX20_01509 0.48 +0.6

Or see this region's nucleotide sequence