Experiment: 1-octen-3-ol 0.6784116667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15740 and AZOBR_RS15745 are separated by 213 nucleotides AZOBR_RS15745 and AZOBR_RS15750 are separated by 158 nucleotides AZOBR_RS15750 and AZOBR_RS15760 are separated by 753 nucleotides
AZOBR_RS15740: AZOBR_RS15740 - signal protein PDZ, at 283,067 to 284,047
_RS15740
AZOBR_RS15745: AZOBR_RS15745 - hypothetical protein, at 284,261 to 284,746
_RS15745
AZOBR_RS15750: AZOBR_RS15750 - hypothetical protein, at 284,905 to 285,792
_RS15750
AZOBR_RS15760: AZOBR_RS15760 - ATP-binding protein, at 286,546 to 287,484
_RS15760
Position (kb) 284
285
286 Strain fitness (log2 ratio) -2
-1
0
1
2 at 283.920 kb on + strand, within AZOBR_RS15740 at 283.920 kb on + strand, within AZOBR_RS15740 at 283.921 kb on - strand, within AZOBR_RS15740 at 283.984 kb on - strand at 283.984 kb on - strand at 283.984 kb on - strand at 284.010 kb on + strand at 284.010 kb on + strand at 284.011 kb on - strand at 284.106 kb on - strand at 284.113 kb on + strand at 284.133 kb on - strand at 284.639 kb on + strand, within AZOBR_RS15745 at 284.640 kb on - strand, within AZOBR_RS15745 at 284.658 kb on - strand, within AZOBR_RS15745 at 284.712 kb on - strand at 284.712 kb on - strand at 284.712 kb on - strand at 284.712 kb on - strand at 284.744 kb on + strand at 285.109 kb on + strand, within AZOBR_RS15750 at 285.583 kb on + strand, within AZOBR_RS15750 at 285.584 kb on - strand, within AZOBR_RS15750 at 285.584 kb on - strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.902 kb on + strand at 285.902 kb on + strand at 285.903 kb on - strand at 285.903 kb on - strand at 285.903 kb on - strand at 286.416 kb on + strand at 286.416 kb on + strand at 286.416 kb on + strand at 286.416 kb on + strand at 286.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6784116667 mM remove 283,920 + AZOBR_RS15740 0.87 +0.7 283,920 + AZOBR_RS15740 0.87 +0.1 283,921 - AZOBR_RS15740 0.87 -0.7 283,984 - +0.4 283,984 - -0.1 283,984 - -0.6 284,010 + -1.3 284,010 + +1.2 284,011 - -0.1 284,106 - -0.7 284,113 + +0.1 284,133 - -1.0 284,639 + AZOBR_RS15745 0.78 -0.2 284,640 - AZOBR_RS15745 0.78 +0.3 284,658 - AZOBR_RS15745 0.82 +1.5 284,712 - -0.1 284,712 - +0.8 284,712 - -0.2 284,712 - -0.6 284,744 + +0.5 285,109 + AZOBR_RS15750 0.23 +0.0 285,583 + AZOBR_RS15750 0.76 +0.8 285,584 - AZOBR_RS15750 0.76 -0.1 285,584 - AZOBR_RS15750 0.76 -0.2 285,676 + AZOBR_RS15750 0.87 -0.1 285,676 + AZOBR_RS15750 0.87 -0.5 285,676 + AZOBR_RS15750 0.87 +0.6 285,676 + AZOBR_RS15750 0.87 +1.5 285,677 - AZOBR_RS15750 0.87 +2.0 285,677 - AZOBR_RS15750 0.87 +1.6 285,677 - AZOBR_RS15750 0.87 +1.0 285,677 - AZOBR_RS15750 0.87 -0.1 285,677 - AZOBR_RS15750 0.87 -2.0 285,902 + -1.2 285,902 + +0.3 285,903 - +0.5 285,903 - +0.7 285,903 - -0.7 286,416 + +0.4 286,416 + +0.4 286,416 + -0.1 286,416 + +0.8 286,416 + +0.4
Or see this region's nucleotide sequence