Experiment: 1-octen-3-ol 0.7753276667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17945 and AZOBR_RS17950 are separated by 58 nucleotides AZOBR_RS17950 and AZOBR_RS17955 are separated by 4 nucleotides AZOBR_RS17955 and AZOBR_RS17960 overlap by 13 nucleotides
AZOBR_RS17945: AZOBR_RS17945 - multidrug ABC transporter ATP-binding protein, at 782,764 to 784,440
_RS17945
AZOBR_RS17950: AZOBR_RS17950 - iron ABC transporter, at 784,499 to 786,475
_RS17950
AZOBR_RS17955: AZOBR_RS17955 - amino acid ABC transporter substrate-binding protein, at 786,480 to 787,385
_RS17955
AZOBR_RS17960: AZOBR_RS17960 - iron-hydroxamate transporter ATP-binding protein, at 787,373 to 788,164
_RS17960
Position (kb) 784
785
786
787 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 783.522 kb on - strand, within AZOBR_RS17945 at 783.707 kb on + strand, within AZOBR_RS17945 at 783.708 kb on - strand, within AZOBR_RS17945 at 783.708 kb on - strand, within AZOBR_RS17945 at 783.740 kb on + strand, within AZOBR_RS17945 at 783.741 kb on - strand, within AZOBR_RS17945 at 783.741 kb on - strand, within AZOBR_RS17945 at 783.884 kb on + strand, within AZOBR_RS17945 at 784.215 kb on - strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.250 kb on + strand, within AZOBR_RS17945 at 784.251 kb on - strand, within AZOBR_RS17945 at 784.251 kb on - strand, within AZOBR_RS17945 at 784.415 kb on + strand at 784.415 kb on + strand at 784.418 kb on + strand at 784.418 kb on + strand at 784.419 kb on - strand at 784.419 kb on - strand at 784.419 kb on - strand at 784.419 kb on - strand at 784.588 kb on - strand at 785.982 kb on + strand, within AZOBR_RS17950 at 785.983 kb on - strand, within AZOBR_RS17950 at 786.171 kb on + strand, within AZOBR_RS17950 at 786.172 kb on - strand, within AZOBR_RS17950 at 786.333 kb on + strand at 786.739 kb on + strand, within AZOBR_RS17955 at 786.994 kb on + strand, within AZOBR_RS17955 at 786.994 kb on + strand, within AZOBR_RS17955 at 786.995 kb on - strand, within AZOBR_RS17955 at 787.015 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.073 kb on - strand, within AZOBR_RS17955 at 787.073 kb on - strand, within AZOBR_RS17955 at 787.073 kb on - strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.124 kb on - strand, within AZOBR_RS17955 at 787.124 kb on - strand, within AZOBR_RS17955 at 787.437 kb on + strand at 787.437 kb on + strand at 787.437 kb on + strand at 787.438 kb on - strand at 787.438 kb on - strand at 787.438 kb on - strand at 787.438 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM remove 783,522 - AZOBR_RS17945 0.45 -0.8 783,707 + AZOBR_RS17945 0.56 -0.8 783,708 - AZOBR_RS17945 0.56 +0.9 783,708 - AZOBR_RS17945 0.56 -0.9 783,740 + AZOBR_RS17945 0.58 -0.7 783,741 - AZOBR_RS17945 0.58 +0.3 783,741 - AZOBR_RS17945 0.58 +0.7 783,884 + AZOBR_RS17945 0.67 -0.6 784,215 - AZOBR_RS17945 0.87 -0.1 784,250 + AZOBR_RS17945 0.89 -1.6 784,250 + AZOBR_RS17945 0.89 -0.1 784,250 + AZOBR_RS17945 0.89 -1.0 784,250 + AZOBR_RS17945 0.89 -0.3 784,250 + AZOBR_RS17945 0.89 -0.0 784,250 + AZOBR_RS17945 0.89 +0.3 784,250 + AZOBR_RS17945 0.89 -0.6 784,251 - AZOBR_RS17945 0.89 +0.7 784,251 - AZOBR_RS17945 0.89 -0.4 784,415 + +1.3 784,415 + +0.3 784,418 + +0.3 784,418 + +0.4 784,419 - -1.1 784,419 - +0.2 784,419 - -0.3 784,419 - +0.0 784,588 - -0.2 785,982 + AZOBR_RS17950 0.75 -0.7 785,983 - AZOBR_RS17950 0.75 -0.0 786,171 + AZOBR_RS17950 0.85 -1.0 786,172 - AZOBR_RS17950 0.85 -0.1 786,333 + -0.1 786,739 + AZOBR_RS17955 0.29 -0.2 786,994 + AZOBR_RS17955 0.57 -1.0 786,994 + AZOBR_RS17955 0.57 +0.1 786,995 - AZOBR_RS17955 0.57 -0.2 787,015 + AZOBR_RS17955 0.59 -0.4 787,072 + AZOBR_RS17955 0.65 +0.1 787,072 + AZOBR_RS17955 0.65 +0.2 787,072 + AZOBR_RS17955 0.65 -0.7 787,072 + AZOBR_RS17955 0.65 -0.2 787,072 + AZOBR_RS17955 0.65 +0.3 787,073 - AZOBR_RS17955 0.65 -0.7 787,073 - AZOBR_RS17955 0.65 +0.1 787,073 - AZOBR_RS17955 0.65 +0.6 787,075 + AZOBR_RS17955 0.66 -0.3 787,075 + AZOBR_RS17955 0.66 -0.2 787,075 + AZOBR_RS17955 0.66 +0.2 787,075 + AZOBR_RS17955 0.66 -0.0 787,076 - AZOBR_RS17955 0.66 -0.4 787,076 - AZOBR_RS17955 0.66 -0.5 787,076 - AZOBR_RS17955 0.66 -0.4 787,076 - AZOBR_RS17955 0.66 -0.4 787,076 - AZOBR_RS17955 0.66 -0.5 787,076 - AZOBR_RS17955 0.66 +0.1 787,124 - AZOBR_RS17955 0.71 -0.5 787,124 - AZOBR_RS17955 0.71 +0.4 787,437 + +0.4 787,437 + -0.5 787,437 + -0.2 787,438 - +1.7 787,438 - +1.3 787,438 - -0.2 787,438 - +3.8
Or see this region's nucleotide sequence