Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS16380

Experiment: 1-octen-3-ol 0.7753276667 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS16375 and AZOBR_RS16380 are separated by 139 nucleotidesAZOBR_RS16380 and AZOBR_RS16385 are separated by 226 nucleotides AZOBR_RS16375: AZOBR_RS16375 - peptidylprolyl isomerase, at 421,479 to 422,924 _RS16375 AZOBR_RS16380: AZOBR_RS16380 - permease, at 423,064 to 424,158 _RS16380 AZOBR_RS16385: AZOBR_RS16385 - aminopeptidase A, at 424,385 to 425,887 _RS16385 Position (kb) 423 424 425Strain fitness (log2 ratio) -1 0 1at 422.957 kb on - strandat 422.960 kb on - strandat 424.234 kb on - strandat 424.234 kb on - strandat 424.234 kb on - strandat 424.234 kb on - strandat 424.238 kb on - strandat 424.299 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM
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422,957 - +1.2
422,960 - +1.2
424,234 - -0.9
424,234 - -0.3
424,234 - +0.3
424,234 - -1.5
424,238 - -1.0
424,299 + -0.1

Or see this region's nucleotide sequence