Experiment: 1-octen-3-ol 0.7753276667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09810 and AZOBR_RS09815 are separated by 163 nucleotides AZOBR_RS09815 and AZOBR_RS09820 are separated by 31 nucleotides AZOBR_RS09820 and AZOBR_RS09825 are separated by 65 nucleotides AZOBR_RS09825 and AZOBR_RS09830 are separated by 137 nucleotides
AZOBR_RS09810: AZOBR_RS09810 - DSBA oxidoreductase, at 2,056,910 to 2,057,563
_RS09810
AZOBR_RS09815: AZOBR_RS09815 - hypothetical protein, at 2,057,727 to 2,058,185
_RS09815
AZOBR_RS09820: AZOBR_RS09820 - hypothetical protein, at 2,058,217 to 2,058,609
_RS09820
AZOBR_RS09825: AZOBR_RS09825 - hypothetical protein, at 2,058,675 to 2,058,899
_RS09825
AZOBR_RS09830: AZOBR_RS09830 - esterase, at 2,059,037 to 2,060,050
_RS09830
Position (kb)
2058
2059 Strain fitness (log2 ratio)
-1
0
1
2 at 2057.397 kb on + strand, within AZOBR_RS09810 at 2057.520 kb on + strand at 2057.520 kb on + strand at 2057.520 kb on + strand at 2057.520 kb on + strand at 2057.521 kb on - strand at 2057.521 kb on - strand at 2057.521 kb on - strand at 2057.564 kb on - strand at 2057.564 kb on - strand at 2057.572 kb on + strand at 2058.366 kb on - strand, within AZOBR_RS09820 at 2058.371 kb on + strand, within AZOBR_RS09820 at 2058.371 kb on + strand, within AZOBR_RS09820 at 2058.371 kb on + strand, within AZOBR_RS09820 at 2058.372 kb on - strand, within AZOBR_RS09820 at 2058.393 kb on - strand, within AZOBR_RS09820 at 2058.410 kb on + strand, within AZOBR_RS09820 at 2058.411 kb on - strand, within AZOBR_RS09820 at 2058.411 kb on - strand, within AZOBR_RS09820 at 2058.662 kb on - strand at 2058.662 kb on - strand at 2058.662 kb on - strand at 2058.784 kb on + strand, within AZOBR_RS09825 at 2058.784 kb on + strand, within AZOBR_RS09825 at 2058.785 kb on - strand, within AZOBR_RS09825 at 2058.785 kb on - strand, within AZOBR_RS09825 at 2059.126 kb on - strand at 2059.507 kb on - strand, within AZOBR_RS09830 at 2059.560 kb on + strand, within AZOBR_RS09830 at 2059.561 kb on - strand, within AZOBR_RS09830 at 2059.561 kb on - strand, within AZOBR_RS09830
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM remove 2,057,397 + AZOBR_RS09810 0.74 -1.7 2,057,520 + +1.3 2,057,520 + +0.9 2,057,520 + -0.2 2,057,520 + +0.8 2,057,521 - +0.0 2,057,521 - -0.3 2,057,521 - -1.3 2,057,564 - +0.4 2,057,564 - -1.4 2,057,572 + +0.0 2,058,366 - AZOBR_RS09820 0.38 -0.8 2,058,371 + AZOBR_RS09820 0.39 +2.2 2,058,371 + AZOBR_RS09820 0.39 +0.9 2,058,371 + AZOBR_RS09820 0.39 -0.2 2,058,372 - AZOBR_RS09820 0.39 +0.1 2,058,393 - AZOBR_RS09820 0.45 -0.2 2,058,410 + AZOBR_RS09820 0.49 -0.9 2,058,411 - AZOBR_RS09820 0.49 -0.1 2,058,411 - AZOBR_RS09820 0.49 -0.3 2,058,662 - -0.6 2,058,662 - +0.0 2,058,662 - +0.5 2,058,784 + AZOBR_RS09825 0.48 +0.4 2,058,784 + AZOBR_RS09825 0.48 +1.0 2,058,785 - AZOBR_RS09825 0.49 -0.2 2,058,785 - AZOBR_RS09825 0.49 -0.3 2,059,126 - -0.1 2,059,507 - AZOBR_RS09830 0.46 +0.0 2,059,560 + AZOBR_RS09830 0.52 -0.9 2,059,561 - AZOBR_RS09830 0.52 -0.6 2,059,561 - AZOBR_RS09830 0.52 -0.2
Or see this region's nucleotide sequence