Experiment: 1-octen-3-ol 0.7753276667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26805 and AZOBR_RS26810 are separated by 60 nucleotides AZOBR_RS26810 and AZOBR_RS26815 are separated by 173 nucleotides
AZOBR_RS26805: AZOBR_RS26805 - malonyl-CoA synthase, at 163,231 to 164,769
_RS26805
AZOBR_RS26810: AZOBR_RS26810 - quinone oxidoreductase, at 164,830 to 165,810
_RS26810
AZOBR_RS26815: AZOBR_RS26815 - 3-hydroxyisobutyrate dehydrogenase, at 165,984 to 166,883
_RS26815
Position (kb) 164
165
166 Strain fitness (log2 ratio) -2
-1
0
1
2 at 164.003 kb on + strand, within AZOBR_RS26805 at 164.004 kb on - strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.276 kb on + strand, within AZOBR_RS26805 at 164.471 kb on + strand, within AZOBR_RS26805 at 164.471 kb on + strand, within AZOBR_RS26805 at 164.492 kb on + strand, within AZOBR_RS26805 at 164.493 kb on - strand, within AZOBR_RS26805 at 164.493 kb on - strand, within AZOBR_RS26805 at 164.514 kb on - strand, within AZOBR_RS26805 at 164.543 kb on + strand, within AZOBR_RS26805 at 164.543 kb on + strand, within AZOBR_RS26805 at 164.660 kb on + strand at 164.753 kb on + strand at 165.168 kb on - strand, within AZOBR_RS26810 at 165.168 kb on - strand, within AZOBR_RS26810 at 165.168 kb on - strand, within AZOBR_RS26810 at 165.420 kb on - strand, within AZOBR_RS26810 at 165.420 kb on - strand, within AZOBR_RS26810 at 165.674 kb on + strand, within AZOBR_RS26810 at 165.674 kb on + strand, within AZOBR_RS26810 at 165.675 kb on - strand, within AZOBR_RS26810 at 165.675 kb on - strand, within AZOBR_RS26810 at 165.947 kb on - strand at 165.958 kb on + strand at 165.959 kb on - strand at 165.959 kb on - strand at 165.970 kb on + strand at 165.970 kb on + strand at 165.970 kb on + strand at 165.971 kb on - strand at 166.070 kb on - strand at 166.070 kb on - strand at 166.180 kb on + strand, within AZOBR_RS26815 at 166.180 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.229 kb on - strand, within AZOBR_RS26815 at 166.229 kb on - strand, within AZOBR_RS26815 at 166.229 kb on - strand, within AZOBR_RS26815 at 166.276 kb on + strand, within AZOBR_RS26815 at 166.276 kb on + strand, within AZOBR_RS26815 at 166.276 kb on + strand, within AZOBR_RS26815 at 166.277 kb on - strand, within AZOBR_RS26815 at 166.660 kb on + strand, within AZOBR_RS26815
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM remove 164,003 + AZOBR_RS26805 0.50 +0.3 164,004 - AZOBR_RS26805 0.50 +0.8 164,102 + AZOBR_RS26805 0.57 -0.5 164,102 + AZOBR_RS26805 0.57 +1.0 164,102 + AZOBR_RS26805 0.57 +0.2 164,102 + AZOBR_RS26805 0.57 +0.5 164,102 + AZOBR_RS26805 0.57 +0.8 164,103 - AZOBR_RS26805 0.57 +0.6 164,103 - AZOBR_RS26805 0.57 -1.8 164,103 - AZOBR_RS26805 0.57 +2.7 164,103 - AZOBR_RS26805 0.57 +0.1 164,103 - AZOBR_RS26805 0.57 +0.1 164,276 + AZOBR_RS26805 0.68 +0.1 164,471 + AZOBR_RS26805 0.81 +0.4 164,471 + AZOBR_RS26805 0.81 -0.3 164,492 + AZOBR_RS26805 0.82 +0.2 164,493 - AZOBR_RS26805 0.82 +0.8 164,493 - AZOBR_RS26805 0.82 +0.2 164,514 - AZOBR_RS26805 0.83 +0.3 164,543 + AZOBR_RS26805 0.85 +1.4 164,543 + AZOBR_RS26805 0.85 +1.4 164,660 + +0.3 164,753 + +0.8 165,168 - AZOBR_RS26810 0.34 -0.2 165,168 - AZOBR_RS26810 0.34 +0.4 165,168 - AZOBR_RS26810 0.34 +0.3 165,420 - AZOBR_RS26810 0.60 -0.3 165,420 - AZOBR_RS26810 0.60 -0.4 165,674 + AZOBR_RS26810 0.86 -1.2 165,674 + AZOBR_RS26810 0.86 -0.1 165,675 - AZOBR_RS26810 0.86 -0.5 165,675 - AZOBR_RS26810 0.86 -0.1 165,947 - +0.1 165,958 + +0.3 165,959 - -0.0 165,959 - +0.2 165,970 + -1.2 165,970 + +0.6 165,970 + +0.0 165,971 - +0.0 166,070 - +0.2 166,070 - -0.1 166,180 + AZOBR_RS26815 0.22 +0.2 166,180 + AZOBR_RS26815 0.22 -0.8 166,228 + AZOBR_RS26815 0.27 -0.0 166,228 + AZOBR_RS26815 0.27 +0.1 166,228 + AZOBR_RS26815 0.27 +0.4 166,228 + AZOBR_RS26815 0.27 -0.1 166,228 + AZOBR_RS26815 0.27 +0.9 166,229 - AZOBR_RS26815 0.27 +0.2 166,229 - AZOBR_RS26815 0.27 -0.3 166,229 - AZOBR_RS26815 0.27 -0.2 166,276 + AZOBR_RS26815 0.32 +0.6 166,276 + AZOBR_RS26815 0.32 -0.5 166,276 + AZOBR_RS26815 0.32 -0.6 166,277 - AZOBR_RS26815 0.33 -0.6 166,660 + AZOBR_RS26815 0.75 +0.2
Or see this region's nucleotide sequence