Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS26195

Experiment: 1-octen-3-ol 0.7753276667 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt AZOBR_RS26195: AZOBR_RS26195 - hypothetical protein, at 23,379 to 24,317 _RS26195 Position (kb) 23 24 25Strain fitness (log2 ratio) -1 0 1 2at 22.402 kb on + strandat 22.402 kb on + strandat 22.402 kb on + strandat 22.402 kb on + strandat 22.403 kb on - strandat 22.403 kb on - strandat 22.403 kb on - strandat 22.440 kb on + strandat 22.441 kb on - strandat 22.441 kb on - strandat 22.442 kb on + strandat 22.589 kb on - strandat 22.656 kb on + strandat 22.656 kb on + strandat 22.656 kb on + strandat 22.697 kb on + strandat 22.697 kb on + strandat 22.697 kb on + strandat 22.697 kb on + strandat 22.697 kb on + strandat 22.698 kb on - strandat 22.698 kb on - strandat 22.702 kb on + strandat 22.702 kb on + strandat 22.703 kb on - strandat 22.703 kb on - strandat 22.709 kb on + strandat 22.710 kb on - strandat 22.758 kb on - strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.763 kb on + strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.764 kb on - strandat 22.944 kb on - strandat 22.986 kb on + strandat 23.183 kb on + strandat 23.184 kb on - strandat 23.184 kb on - strandat 23.184 kb on - strandat 23.185 kb on + strandat 23.186 kb on - strandat 23.213 kb on + strandat 23.213 kb on + strandat 23.213 kb on + strandat 23.214 kb on - strandat 23.214 kb on - strandat 23.259 kb on + strandat 23.259 kb on + strandat 23.259 kb on + strandat 23.275 kb on + strandat 23.275 kb on + strandat 23.276 kb on - strandat 23.276 kb on - strandat 23.358 kb on - strandat 23.358 kb on - strandat 23.421 kb on + strandat 23.421 kb on + strandat 23.421 kb on + strandat 23.421 kb on + strandat 23.422 kb on - strandat 23.422 kb on - strandat 23.422 kb on - strandat 23.760 kb on - strand, within AZOBR_RS26195at 23.774 kb on + strand, within AZOBR_RS26195at 23.774 kb on + strand, within AZOBR_RS26195at 23.775 kb on - strand, within AZOBR_RS26195at 23.775 kb on - strand, within AZOBR_RS26195at 23.775 kb on - strand, within AZOBR_RS26195at 23.829 kb on + strand, within AZOBR_RS26195at 23.830 kb on - strand, within AZOBR_RS26195at 23.912 kb on + strand, within AZOBR_RS26195at 23.945 kb on + strand, within AZOBR_RS26195at 23.945 kb on + strand, within AZOBR_RS26195at 23.945 kb on + strand, within AZOBR_RS26195at 23.971 kb on + strand, within AZOBR_RS26195at 24.000 kb on + strand, within AZOBR_RS26195at 24.008 kb on + strand, within AZOBR_RS26195at 24.041 kb on + strand, within AZOBR_RS26195at 24.041 kb on + strand, within AZOBR_RS26195at 24.041 kb on + strandat 24.042 kb on - strand, within AZOBR_RS26195at 24.042 kb on - strand, within AZOBR_RS26195at 24.042 kb on - strand, within AZOBR_RS26195at 24.084 kb on + strand, within AZOBR_RS26195at 24.084 kb on + strand, within AZOBR_RS26195at 24.085 kb on - strand, within AZOBR_RS26195at 24.085 kb on - strand, within AZOBR_RS26195at 24.141 kb on + strand, within AZOBR_RS26195at 24.142 kb on - strand, within AZOBR_RS26195at 24.195 kb on + strand, within AZOBR_RS26195at 24.195 kb on + strand, within AZOBR_RS26195at 24.195 kb on + strand, within AZOBR_RS26195at 24.195 kb on + strand, within AZOBR_RS26195at 24.196 kb on - strand, within AZOBR_RS26195at 24.196 kb on - strand, within AZOBR_RS26195at 24.196 kb on - strand, within AZOBR_RS26195at 24.196 kb on - strand, within AZOBR_RS26195at 24.196 kb on - strand, within AZOBR_RS26195at 24.274 kb on + strandat 24.274 kb on + strandat 24.274 kb on + strandat 24.274 kb on + strandat 24.275 kb on - strandat 24.275 kb on - strandat 24.275 kb on - strandat 24.282 kb on + strandat 24.308 kb on + strandat 24.380 kb on + strandat 24.473 kb on - strandat 24.473 kb on - strandat 24.503 kb on + strandat 24.504 kb on - strandat 24.511 kb on + strandat 24.512 kb on - strandat 24.623 kb on + strandat 24.787 kb on - strandat 24.841 kb on + strandat 24.910 kb on - strandat 24.921 kb on - strandat 24.931 kb on + strandat 24.932 kb on - strandat 25.152 kb on - strandat 25.152 kb on - strandat 25.153 kb on + strandat 25.154 kb on - strandat 25.206 kb on + strandat 25.251 kb on + strandat 25.252 kb on - strandat 25.252 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM
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22,402 + +1.8
22,402 + -0.5
22,402 + +0.3
22,402 + +1.1
22,403 - -0.2
22,403 - -1.1
22,403 - +0.4
22,440 + -0.2
22,441 - -0.2
22,441 - +0.1
22,442 + -0.2
22,589 - +1.1
22,656 + +2.1
22,656 + -0.2
22,656 + -0.2
22,697 + -0.2
22,697 + +0.2
22,697 + -0.2
22,697 + +2.1
22,697 + +1.1
22,698 - +1.1
22,698 - +0.5
22,702 + +0.9
22,702 + -0.5
22,703 - +0.5
22,703 - +0.5
22,709 + +2.1
22,710 - +0.5
22,758 - +2.1
22,763 + +0.5
22,763 + -0.7
22,763 + +2.1
22,763 + +2.1
22,763 + +2.1
22,763 + -0.9
22,763 + +1.1
22,763 + -1.6
22,764 - +2.1
22,764 - -0.7
22,764 - +2.1
22,764 - +2.1
22,764 - +1.1
22,764 - +2.1
22,764 - +0.1
22,764 - +1.1
22,944 - +1.1
22,986 + +2.1
23,183 + +1.4
23,184 - -0.2
23,184 - -0.6
23,184 - +0.1
23,185 + -0.4
23,186 - +2.1
23,213 + +2.1
23,213 + +1.1
23,213 + -0.1
23,214 - +1.1
23,214 - +2.1
23,259 + +0.8
23,259 + +1.1
23,259 + +0.9
23,275 + +0.5
23,275 + +0.1
23,276 - -0.4
23,276 - +0.9
23,358 - +2.1
23,358 - +0.2
23,421 + +0.4
23,421 + +1.1
23,421 + +1.1
23,421 + +1.1
23,422 - +0.1
23,422 - +1.1
23,422 - +2.1
23,760 - AZOBR_RS26195 0.41 -0.5
23,774 + AZOBR_RS26195 0.42 +1.1
23,774 + AZOBR_RS26195 0.42 -1.6
23,775 - AZOBR_RS26195 0.42 +2.1
23,775 - AZOBR_RS26195 0.42 +0.1
23,775 - AZOBR_RS26195 0.42 +2.1
23,829 + AZOBR_RS26195 0.48 +0.5
23,830 - AZOBR_RS26195 0.48 +1.1
23,912 + AZOBR_RS26195 0.57 +1.1
23,945 + AZOBR_RS26195 0.60 +1.5
23,945 + AZOBR_RS26195 0.60 +1.1
23,945 + AZOBR_RS26195 0.60 +1.1
23,971 + AZOBR_RS26195 0.63 +0.5
24,000 + AZOBR_RS26195 0.66 +1.1
24,008 + AZOBR_RS26195 0.67 +2.1
24,041 + AZOBR_RS26195 0.71 +0.5
24,041 + AZOBR_RS26195 0.71 -0.5
24,041 + -0.1
24,042 - AZOBR_RS26195 0.71 +2.1
24,042 - AZOBR_RS26195 0.71 -0.5
24,042 - AZOBR_RS26195 0.71 +2.1
24,084 + AZOBR_RS26195 0.75 +2.1
24,084 + AZOBR_RS26195 0.75 +1.1
24,085 - AZOBR_RS26195 0.75 +2.1
24,085 - AZOBR_RS26195 0.75 +1.1
24,141 + AZOBR_RS26195 0.81 +0.5
24,142 - AZOBR_RS26195 0.81 -0.3
24,195 + AZOBR_RS26195 0.87 +2.1
24,195 + AZOBR_RS26195 0.87 +2.1
24,195 + AZOBR_RS26195 0.87 +2.1
24,195 + AZOBR_RS26195 0.87 +2.1
24,196 - AZOBR_RS26195 0.87 +1.1
24,196 - AZOBR_RS26195 0.87 +1.1
24,196 - AZOBR_RS26195 0.87 +0.1
24,196 - AZOBR_RS26195 0.87 +2.1
24,196 - AZOBR_RS26195 0.87 +2.1
24,274 + +1.1
24,274 + +1.1
24,274 + +1.1
24,274 + +1.1
24,275 - +1.1
24,275 - -0.2
24,275 - -0.2
24,282 + +2.1
24,308 + +2.1
24,380 + +2.1
24,473 - +0.5
24,473 - +2.1
24,503 + +0.1
24,504 - +1.1
24,511 + +0.5
24,512 - -0.2
24,623 + -0.5
24,787 - +0.5
24,841 + +1.1
24,910 - +0.1
24,921 - -1.4
24,931 + +2.1
24,932 - -0.2
25,152 - +2.1
25,152 - +0.1
25,153 + +2.1
25,154 - -0.9
25,206 + +2.1
25,251 + +2.1
25,252 - +0.5
25,252 - +0.1

Or see this region's nucleotide sequence