Experiment: 1-octen-3-ol 0.7753276667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09680 and AZOBR_RS09685 are separated by 305 nucleotides AZOBR_RS09685 and AZOBR_RS09690 are separated by 145 nucleotides AZOBR_RS09690 and AZOBR_RS09695 are separated by 55 nucleotides
AZOBR_RS09680: AZOBR_RS09680 - N-acetylglucosamine-1-phosphate uridyltransferase, at 2,029,931 to 2,031,286
_RS09680
AZOBR_RS09685: AZOBR_RS09685 - phosphoglycolate phosphatase, at 2,031,592 to 2,032,272
_RS09685
AZOBR_RS09690: AZOBR_RS09690 - hypothetical protein, at 2,032,418 to 2,032,696
_RS09690
AZOBR_RS09695: AZOBR_RS09695 - hypothetical protein, at 2,032,752 to 2,033,486
_RS09695
Position (kb)
2031
2032
2033 Strain fitness (log2 ratio)
-1
0
1 at 2031.303 kb on - strand at 2031.457 kb on + strand at 2031.457 kb on + strand at 2031.457 kb on + strand at 2031.458 kb on - strand at 2031.458 kb on - strand at 2031.458 kb on - strand at 2031.458 kb on - strand at 2031.489 kb on + strand at 2031.490 kb on - strand at 2031.490 kb on - strand at 2031.490 kb on - strand at 2031.542 kb on + strand at 2031.554 kb on + strand at 2031.842 kb on - strand, within AZOBR_RS09685 at 2031.854 kb on - strand, within AZOBR_RS09685 at 2032.132 kb on - strand, within AZOBR_RS09685 at 2032.174 kb on + strand, within AZOBR_RS09685 at 2032.174 kb on + strand, within AZOBR_RS09685 at 2032.174 kb on + strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.176 kb on - strand, within AZOBR_RS09685 at 2032.346 kb on + strand at 2032.346 kb on + strand at 2032.346 kb on + strand at 2032.366 kb on + strand at 2032.367 kb on - strand at 2032.511 kb on - strand, within AZOBR_RS09690 at 2032.655 kb on + strand, within AZOBR_RS09690 at 2032.655 kb on + strand, within AZOBR_RS09690 at 2032.656 kb on - strand, within AZOBR_RS09690 at 2032.656 kb on - strand, within AZOBR_RS09690 at 2033.021 kb on - strand, within AZOBR_RS09695 at 2033.038 kb on + strand, within AZOBR_RS09695 at 2033.038 kb on + strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.258 kb on + strand, within AZOBR_RS09695
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM remove 2,031,303 - -0.8 2,031,457 + -0.5 2,031,457 + -1.0 2,031,457 + +0.4 2,031,458 - -0.4 2,031,458 - +0.7 2,031,458 - +1.2 2,031,458 - +0.5 2,031,489 + -1.1 2,031,490 - -0.6 2,031,490 - +0.5 2,031,490 - -0.5 2,031,542 + +1.4 2,031,554 + +0.3 2,031,842 - AZOBR_RS09685 0.37 +0.4 2,031,854 - AZOBR_RS09685 0.38 +0.0 2,032,132 - AZOBR_RS09685 0.79 +0.6 2,032,174 + AZOBR_RS09685 0.85 -0.9 2,032,174 + AZOBR_RS09685 0.85 +0.1 2,032,174 + AZOBR_RS09685 0.85 +0.3 2,032,175 - AZOBR_RS09685 0.86 +0.3 2,032,175 - AZOBR_RS09685 0.86 +0.7 2,032,175 - AZOBR_RS09685 0.86 -0.1 2,032,175 - AZOBR_RS09685 0.86 +1.0 2,032,175 - AZOBR_RS09685 0.86 -1.6 2,032,176 - AZOBR_RS09685 0.86 +0.0 2,032,346 + +0.2 2,032,346 + -0.9 2,032,346 + +0.4 2,032,366 + -0.1 2,032,367 - -1.2 2,032,511 - AZOBR_RS09690 0.33 -0.1 2,032,655 + AZOBR_RS09690 0.85 +0.2 2,032,655 + AZOBR_RS09690 0.85 +0.2 2,032,656 - AZOBR_RS09690 0.85 -0.0 2,032,656 - AZOBR_RS09690 0.85 +0.3 2,033,021 - AZOBR_RS09695 0.37 -0.0 2,033,038 + AZOBR_RS09695 0.39 -0.2 2,033,038 + AZOBR_RS09695 0.39 +0.6 2,033,039 - AZOBR_RS09695 0.39 +0.3 2,033,039 - AZOBR_RS09695 0.39 -0.0 2,033,039 - AZOBR_RS09695 0.39 -1.0 2,033,039 - AZOBR_RS09695 0.39 +0.4 2,033,039 - AZOBR_RS09695 0.39 +1.0 2,033,258 + AZOBR_RS09695 0.69 -0.6
Or see this region's nucleotide sequence