Experiment: 1-octen-3-ol 0.7753276667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03820 and AZOBR_RS03825 are separated by 29 nucleotides AZOBR_RS03825 and AZOBR_RS03830 are separated by 93 nucleotides
AZOBR_RS03820: AZOBR_RS03820 - microcin C ABC transporter permease YejB, at 805,221 to 806,330
_RS03820
AZOBR_RS03825: AZOBR_RS03825 - hypothetical protein, at 806,360 to 808,246
_RS03825
AZOBR_RS03830: AZOBR_RS03830 - ABC transporter substrate-binding protein, at 808,340 to 810,178
_RS03830
Position (kb) 806
807
808
809 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.652 kb on - strand, within AZOBR_RS03820 at 805.880 kb on - strand, within AZOBR_RS03820 at 805.967 kb on - strand, within AZOBR_RS03820 at 805.994 kb on - strand, within AZOBR_RS03820 at 805.994 kb on - strand, within AZOBR_RS03820 at 806.320 kb on + strand at 806.320 kb on + strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.445 kb on + strand at 806.485 kb on - strand at 806.526 kb on + strand at 806.526 kb on + strand at 806.527 kb on - strand at 806.527 kb on - strand at 807.156 kb on + strand, within AZOBR_RS03825 at 807.156 kb on + strand, within AZOBR_RS03825 at 807.157 kb on - strand, within AZOBR_RS03825 at 807.195 kb on + strand, within AZOBR_RS03825 at 807.426 kb on + strand, within AZOBR_RS03825 at 807.426 kb on + strand, within AZOBR_RS03825 at 807.742 kb on - strand, within AZOBR_RS03825 at 807.744 kb on + strand, within AZOBR_RS03825 at 807.744 kb on + strand, within AZOBR_RS03825 at 807.744 kb on + strand, within AZOBR_RS03825 at 807.745 kb on - strand, within AZOBR_RS03825 at 808.071 kb on + strand at 808.071 kb on + strand at 808.200 kb on + strand at 808.201 kb on - strand at 808.201 kb on - strand at 808.201 kb on - strand at 808.262 kb on + strand at 808.262 kb on + strand at 808.262 kb on + strand at 808.321 kb on + strand at 808.322 kb on - strand at 808.395 kb on + strand at 808.395 kb on + strand at 808.396 kb on - strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.477 kb on - strand at 808.477 kb on - strand at 808.596 kb on + strand, within AZOBR_RS03830 at 808.596 kb on + strand, within AZOBR_RS03830 at 808.638 kb on + strand at 808.788 kb on + strand, within AZOBR_RS03830 at 808.788 kb on + strand, within AZOBR_RS03830 at 808.788 kb on + strand, within AZOBR_RS03830 at 808.789 kb on - strand, within AZOBR_RS03830 at 808.789 kb on - strand, within AZOBR_RS03830 at 809.107 kb on - strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.7753276667 mM remove 805,546 + AZOBR_RS03820 0.29 -0.6 805,546 + AZOBR_RS03820 0.29 +0.0 805,546 + AZOBR_RS03820 0.29 -0.3 805,547 - AZOBR_RS03820 0.29 +0.7 805,547 - AZOBR_RS03820 0.29 -1.2 805,547 - AZOBR_RS03820 0.29 -1.4 805,547 - AZOBR_RS03820 0.29 +0.2 805,547 - AZOBR_RS03820 0.29 -1.3 805,651 + AZOBR_RS03820 0.39 -1.3 805,651 + AZOBR_RS03820 0.39 +0.0 805,651 + AZOBR_RS03820 0.39 +0.3 805,651 + AZOBR_RS03820 0.39 +1.0 805,652 - AZOBR_RS03820 0.39 +0.0 805,880 - AZOBR_RS03820 0.59 -0.3 805,967 - AZOBR_RS03820 0.67 -0.2 805,994 - AZOBR_RS03820 0.70 +2.0 805,994 - AZOBR_RS03820 0.70 -0.6 806,320 + -0.4 806,320 + +0.5 806,321 - -0.1 806,321 - -1.7 806,321 - +0.8 806,321 - +0.0 806,445 + -0.4 806,485 - +0.2 806,526 + +0.5 806,526 + -0.3 806,527 - -0.7 806,527 - +0.4 807,156 + AZOBR_RS03825 0.42 +0.0 807,156 + AZOBR_RS03825 0.42 -1.4 807,157 - AZOBR_RS03825 0.42 -1.9 807,195 + AZOBR_RS03825 0.44 -0.2 807,426 + AZOBR_RS03825 0.56 -0.2 807,426 + AZOBR_RS03825 0.56 -1.4 807,742 - AZOBR_RS03825 0.73 -0.3 807,744 + AZOBR_RS03825 0.73 -0.3 807,744 + AZOBR_RS03825 0.73 -0.7 807,744 + AZOBR_RS03825 0.73 -0.3 807,745 - AZOBR_RS03825 0.73 -0.3 808,071 + -1.4 808,071 + -0.1 808,200 + -1.0 808,201 - +3.0 808,201 - -0.5 808,201 - -0.7 808,262 + -0.3 808,262 + -0.1 808,262 + -0.1 808,321 + -0.2 808,322 - -0.2 808,395 + -0.2 808,395 + +2.0 808,396 - +0.0 808,476 + +1.7 808,476 + -0.7 808,476 + -0.4 808,476 + +0.6 808,476 + -0.5 808,476 + -0.5 808,477 - +0.8 808,477 - +0.1 808,596 + AZOBR_RS03830 0.14 -0.1 808,596 + AZOBR_RS03830 0.14 -0.5 808,638 + +0.0 808,788 + AZOBR_RS03830 0.24 -0.6 808,788 + AZOBR_RS03830 0.24 +0.3 808,788 + AZOBR_RS03830 0.24 -0.6 808,789 - AZOBR_RS03830 0.24 -0.6 808,789 - AZOBR_RS03830 0.24 +0.4 809,107 - AZOBR_RS03830 0.42 -0.6 809,145 + AZOBR_RS03830 0.44 -0.3 809,145 + AZOBR_RS03830 0.44 +0.4 809,145 + AZOBR_RS03830 0.44 -0.2 809,145 + AZOBR_RS03830 0.44 -0.4 809,145 + AZOBR_RS03830 0.44 -1.0
Or see this region's nucleotide sequence