Experiment: 6-Pentyl-2H-pyran-2-one 0.5570485 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24295 and AZOBR_RS24300 are separated by 201 nucleotides
AZOBR_RS24295: AZOBR_RS24295 - ribonucleotide-diphosphate reductase subunit beta, at 497,805 to 498,896
_RS24295
AZOBR_RS24300: AZOBR_RS24300 - methylcitrate synthase, at 499,098 to 500,261
_RS24300
Position (kb) 499
500
501 Strain fitness (log2 ratio) -1
0
1
2 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.259 kb on - strand, within AZOBR_RS24295 at 498.259 kb on - strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.634 kb on - strand, within AZOBR_RS24295 at 498.634 kb on - strand, within AZOBR_RS24295 at 498.678 kb on + strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.709 kb on - strand, within AZOBR_RS24295 at 498.801 kb on + strand at 499.042 kb on + strand at 499.042 kb on + strand at 499.230 kb on + strand, within AZOBR_RS24300 at 499.279 kb on - strand, within AZOBR_RS24300 at 499.326 kb on + strand, within AZOBR_RS24300 at 499.327 kb on - strand, within AZOBR_RS24300 at 499.327 kb on - strand, within AZOBR_RS24300 at 499.327 kb on - strand, within AZOBR_RS24300 at 499.537 kb on - strand, within AZOBR_RS24300 at 499.680 kb on + strand, within AZOBR_RS24300 at 499.837 kb on - strand, within AZOBR_RS24300 at 499.920 kb on + strand, within AZOBR_RS24300 at 499.920 kb on + strand, within AZOBR_RS24300 at 499.920 kb on + strand, within AZOBR_RS24300 at 499.921 kb on - strand, within AZOBR_RS24300 at 500.085 kb on + strand, within AZOBR_RS24300 at 500.085 kb on + strand, within AZOBR_RS24300 at 500.085 kb on + strand, within AZOBR_RS24300 at 500.086 kb on - strand, within AZOBR_RS24300 at 500.086 kb on - strand, within AZOBR_RS24300 at 500.086 kb on - strand, within AZOBR_RS24300 at 500.086 kb on - strand, within AZOBR_RS24300 at 500.211 kb on + strand at 500.211 kb on + strand at 500.211 kb on + strand at 500.211 kb on + strand at 500.211 kb on + strand at 500.211 kb on + strand at 500.211 kb on + strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.212 kb on - strand at 500.376 kb on + strand at 500.376 kb on + strand at 500.376 kb on + strand at 500.377 kb on - strand at 500.377 kb on - strand at 500.647 kb on - strand at 501.211 kb on + strand at 501.212 kb on - strand at 501.212 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.5570485 mM remove 498,172 - AZOBR_RS24295 0.34 -0.6 498,172 - AZOBR_RS24295 0.34 +0.3 498,172 - AZOBR_RS24295 0.34 +0.9 498,258 + AZOBR_RS24295 0.41 -0.9 498,258 + AZOBR_RS24295 0.41 +0.4 498,258 + AZOBR_RS24295 0.41 +0.2 498,258 + AZOBR_RS24295 0.41 +1.5 498,258 + AZOBR_RS24295 0.41 -0.0 498,258 + AZOBR_RS24295 0.41 +0.6 498,259 - AZOBR_RS24295 0.42 +0.1 498,259 - AZOBR_RS24295 0.42 -0.0 498,624 + AZOBR_RS24295 0.75 +1.9 498,624 + AZOBR_RS24295 0.75 +1.4 498,624 + AZOBR_RS24295 0.75 +0.5 498,625 - AZOBR_RS24295 0.75 -0.5 498,625 - AZOBR_RS24295 0.75 +0.1 498,625 - AZOBR_RS24295 0.75 +0.0 498,625 - AZOBR_RS24295 0.75 -0.6 498,633 + AZOBR_RS24295 0.76 +0.2 498,633 + AZOBR_RS24295 0.76 +0.9 498,633 + AZOBR_RS24295 0.76 -0.6 498,634 - AZOBR_RS24295 0.76 -0.2 498,634 - AZOBR_RS24295 0.76 +1.0 498,678 + AZOBR_RS24295 0.80 -0.8 498,679 - AZOBR_RS24295 0.80 -0.8 498,679 - AZOBR_RS24295 0.80 -0.7 498,679 - AZOBR_RS24295 0.80 -0.2 498,709 - AZOBR_RS24295 0.83 -1.1 498,801 + -0.4 499,042 + +0.8 499,042 + -0.5 499,230 + AZOBR_RS24300 0.11 +0.0 499,279 - AZOBR_RS24300 0.16 -0.1 499,326 + AZOBR_RS24300 0.20 +0.2 499,327 - AZOBR_RS24300 0.20 +0.4 499,327 - AZOBR_RS24300 0.20 -0.0 499,327 - AZOBR_RS24300 0.20 +0.4 499,537 - AZOBR_RS24300 0.38 +0.5 499,680 + AZOBR_RS24300 0.50 -0.3 499,837 - AZOBR_RS24300 0.63 -0.1 499,920 + AZOBR_RS24300 0.71 +0.6 499,920 + AZOBR_RS24300 0.71 -0.3 499,920 + AZOBR_RS24300 0.71 +0.6 499,921 - AZOBR_RS24300 0.71 -0.4 500,085 + AZOBR_RS24300 0.85 +0.6 500,085 + AZOBR_RS24300 0.85 -0.1 500,085 + AZOBR_RS24300 0.85 -0.6 500,086 - AZOBR_RS24300 0.85 +0.1 500,086 - AZOBR_RS24300 0.85 -0.1 500,086 - AZOBR_RS24300 0.85 +0.2 500,086 - AZOBR_RS24300 0.85 -0.1 500,211 + -0.2 500,211 + -0.2 500,211 + +1.1 500,211 + -1.5 500,211 + -0.5 500,211 + +0.5 500,211 + -0.3 500,212 - -0.1 500,212 - -0.4 500,212 - +0.7 500,212 - +0.1 500,212 - -1.1 500,212 - +1.3 500,212 - -0.9 500,212 - -1.3 500,212 - -0.4 500,212 - +0.3 500,376 + -0.5 500,376 + +0.1 500,376 + -0.2 500,377 - -1.3 500,377 - -0.2 500,647 - -0.5 501,211 + +0.5 501,212 - -0.5 501,212 - -0.0
Or see this region's nucleotide sequence