Experiment: 6-Pentyl-2H-pyran-2-one 0.5570485 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24285 and AZOBR_RS22260 are separated by 143 nucleotides AZOBR_RS22260 and AZOBR_RS24290 are separated by 154 nucleotides AZOBR_RS24290 and AZOBR_RS24295 are separated by 53 nucleotides
AZOBR_RS24285: AZOBR_RS24285 - hypothetical protein, at 495,073 to 495,330
_RS24285
AZOBR_RS22260: AZOBR_RS22260 - cobalamin, at 495,474 to 495,722
_RS22260
AZOBR_RS24290: AZOBR_RS24290 - ribonucleotide-diphosphate reductase subunit alpha, at 495,877 to 497,751
_RS24290
AZOBR_RS24295: AZOBR_RS24295 - ribonucleotide-diphosphate reductase subunit beta, at 497,805 to 498,896
_RS24295
Position (kb) 495
496
497
498 Strain fitness (log2 ratio) -1
0
1
2 at 495.271 kb on + strand, within AZOBR_RS24285 at 495.272 kb on - strand, within AZOBR_RS24285 at 495.514 kb on + strand, within AZOBR_RS22260 at 495.514 kb on + strand, within AZOBR_RS22260 at 495.520 kb on + strand, within AZOBR_RS22260 at 495.520 kb on + strand, within AZOBR_RS22260 at 495.521 kb on - strand, within AZOBR_RS22260 at 496.045 kb on + strand at 496.066 kb on + strand, within AZOBR_RS24290 at 496.067 kb on - strand, within AZOBR_RS24290 at 496.099 kb on + strand, within AZOBR_RS24290 at 496.099 kb on + strand, within AZOBR_RS24290 at 496.100 kb on - strand, within AZOBR_RS24290 at 496.132 kb on + strand, within AZOBR_RS24290 at 496.133 kb on - strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.313 kb on - strand, within AZOBR_RS24290 at 496.362 kb on + strand, within AZOBR_RS24290 at 496.362 kb on + strand, within AZOBR_RS24290 at 496.363 kb on - strand, within AZOBR_RS24290 at 496.453 kb on + strand, within AZOBR_RS24290 at 496.453 kb on + strand, within AZOBR_RS24290 at 496.700 kb on - strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.294 kb on - strand, within AZOBR_RS24290 at 497.294 kb on - strand, within AZOBR_RS24290 at 497.294 kb on - strand, within AZOBR_RS24290 at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.632 kb on + strand at 497.632 kb on + strand at 497.632 kb on + strand at 497.633 kb on - strand at 497.883 kb on + strand at 497.883 kb on + strand at 497.910 kb on + strand at 497.910 kb on + strand at 497.910 kb on + strand at 497.911 kb on - strand at 497.916 kb on + strand, within AZOBR_RS24295 at 498.078 kb on + strand, within AZOBR_RS24295 at 498.078 kb on + strand, within AZOBR_RS24295 at 498.091 kb on - strand, within AZOBR_RS24295 at 498.091 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.259 kb on - strand, within AZOBR_RS24295 at 498.259 kb on - strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.634 kb on - strand, within AZOBR_RS24295 at 498.634 kb on - strand, within AZOBR_RS24295 at 498.678 kb on + strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.709 kb on - strand, within AZOBR_RS24295
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.5570485 mM remove 495,271 + AZOBR_RS24285 0.77 -0.3 495,272 - AZOBR_RS24285 0.77 +0.5 495,514 + AZOBR_RS22260 0.16 -0.1 495,514 + AZOBR_RS22260 0.16 +0.4 495,520 + AZOBR_RS22260 0.18 -0.2 495,520 + AZOBR_RS22260 0.18 +0.9 495,521 - AZOBR_RS22260 0.19 -1.1 496,045 + -0.1 496,066 + AZOBR_RS24290 0.10 +0.6 496,067 - AZOBR_RS24290 0.10 -0.1 496,099 + AZOBR_RS24290 0.12 +1.9 496,099 + AZOBR_RS24290 0.12 +0.5 496,100 - AZOBR_RS24290 0.12 +0.3 496,132 + AZOBR_RS24290 0.14 +0.3 496,133 - AZOBR_RS24290 0.14 +0.4 496,312 + AZOBR_RS24290 0.23 -0.7 496,312 + AZOBR_RS24290 0.23 +0.1 496,312 + AZOBR_RS24290 0.23 -0.1 496,312 + AZOBR_RS24290 0.23 +1.9 496,312 + AZOBR_RS24290 0.23 +0.5 496,313 - AZOBR_RS24290 0.23 -0.0 496,362 + AZOBR_RS24290 0.26 +1.9 496,362 + AZOBR_RS24290 0.26 +0.8 496,363 - AZOBR_RS24290 0.26 +0.1 496,453 + AZOBR_RS24290 0.31 -0.0 496,453 + AZOBR_RS24290 0.31 +1.3 496,700 - AZOBR_RS24290 0.44 -0.3 497,293 + AZOBR_RS24290 0.76 +1.3 497,293 + AZOBR_RS24290 0.76 +0.6 497,293 + AZOBR_RS24290 0.76 +0.7 497,293 + AZOBR_RS24290 0.76 -0.8 497,294 - AZOBR_RS24290 0.76 +0.3 497,294 - AZOBR_RS24290 0.76 -0.5 497,294 - AZOBR_RS24290 0.76 +0.5 497,629 + -0.7 497,629 + -1.4 497,629 + -0.1 497,629 + +0.1 497,629 + +0.1 497,629 + +1.1 497,630 - +0.3 497,630 - -0.1 497,630 - -0.6 497,630 - +1.3 497,630 - -0.9 497,630 - +1.0 497,632 + -1.7 497,632 + -0.1 497,632 + +0.1 497,633 - +1.9 497,883 + -1.3 497,883 + -1.1 497,910 + +0.6 497,910 + -0.3 497,910 + +0.3 497,911 - +0.2 497,916 + AZOBR_RS24295 0.10 -0.1 498,078 + AZOBR_RS24295 0.25 +0.2 498,078 + AZOBR_RS24295 0.25 +1.2 498,091 - AZOBR_RS24295 0.26 +0.5 498,091 - AZOBR_RS24295 0.26 -0.4 498,172 - AZOBR_RS24295 0.34 -0.6 498,172 - AZOBR_RS24295 0.34 +0.3 498,172 - AZOBR_RS24295 0.34 +0.9 498,258 + AZOBR_RS24295 0.41 -0.9 498,258 + AZOBR_RS24295 0.41 +0.4 498,258 + AZOBR_RS24295 0.41 +0.2 498,258 + AZOBR_RS24295 0.41 +1.5 498,258 + AZOBR_RS24295 0.41 -0.0 498,258 + AZOBR_RS24295 0.41 +0.6 498,259 - AZOBR_RS24295 0.42 +0.1 498,259 - AZOBR_RS24295 0.42 -0.0 498,624 + AZOBR_RS24295 0.75 +1.9 498,624 + AZOBR_RS24295 0.75 +1.4 498,624 + AZOBR_RS24295 0.75 +0.5 498,625 - AZOBR_RS24295 0.75 -0.5 498,625 - AZOBR_RS24295 0.75 +0.1 498,625 - AZOBR_RS24295 0.75 +0.0 498,625 - AZOBR_RS24295 0.75 -0.6 498,633 + AZOBR_RS24295 0.76 +0.2 498,633 + AZOBR_RS24295 0.76 +0.9 498,633 + AZOBR_RS24295 0.76 -0.6 498,634 - AZOBR_RS24295 0.76 -0.2 498,634 - AZOBR_RS24295 0.76 +1.0 498,678 + AZOBR_RS24295 0.80 -0.8 498,679 - AZOBR_RS24295 0.80 -0.8 498,679 - AZOBR_RS24295 0.80 -0.7 498,679 - AZOBR_RS24295 0.80 -0.2 498,709 - AZOBR_RS24295 0.83 -1.1
Or see this region's nucleotide sequence