Experiment: 6-Pentyl-2H-pyran-2-one 0.5570485 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30705 and AZOBR_RS30710 overlap by 11 nucleotides AZOBR_RS30710 and AZOBR_RS30715 are separated by 228 nucleotides AZOBR_RS30715 and AZOBR_RS30720 are separated by 339 nucleotides
AZOBR_RS30705: AZOBR_RS30705 - alpha/beta hydrolase, at 249,069 to 250,070
_RS30705
AZOBR_RS30710: AZOBR_RS30710 - multidrug ABC transporter ATP-binding protein, at 250,060 to 251,040
_RS30710
AZOBR_RS30715: AZOBR_RS30715 - hypothetical protein, at 251,269 to 251,451
_RS30715
AZOBR_RS30720: AZOBR_RS30720 - diguanylate cyclase, at 251,791 to 253,854
_RS30720
Position (kb)
250
251
252 Strain fitness (log2 ratio)
-2
-1
0
1 at 249.071 kb on - strand at 249.071 kb on - strand at 249.071 kb on - strand at 249.071 kb on - strand at 249.208 kb on + strand, within AZOBR_RS30705 at 249.502 kb on + strand, within AZOBR_RS30705 at 249.502 kb on + strand, within AZOBR_RS30705 at 249.503 kb on - strand, within AZOBR_RS30705 at 249.851 kb on - strand, within AZOBR_RS30705 at 249.851 kb on - strand, within AZOBR_RS30705 at 249.992 kb on - strand at 249.992 kb on - strand at 249.992 kb on - strand at 250.062 kb on - strand at 250.430 kb on + strand, within AZOBR_RS30710 at 250.431 kb on - strand, within AZOBR_RS30710 at 250.431 kb on - strand, within AZOBR_RS30710 at 250.616 kb on + strand, within AZOBR_RS30710 at 250.617 kb on - strand, within AZOBR_RS30710 at 250.691 kb on + strand, within AZOBR_RS30710 at 250.944 kb on + strand at 250.982 kb on + strand at 250.982 kb on + strand at 250.983 kb on - strand at 250.983 kb on - strand at 251.180 kb on - strand at 251.353 kb on + strand, within AZOBR_RS30715 at 251.468 kb on + strand at 251.468 kb on + strand at 251.468 kb on + strand at 251.468 kb on + strand at 251.469 kb on - strand at 251.616 kb on + strand at 251.616 kb on + strand at 251.617 kb on - strand at 251.686 kb on + strand at 251.848 kb on - strand at 251.848 kb on - strand at 251.848 kb on - strand at 251.851 kb on + strand at 251.851 kb on + strand at 251.852 kb on - strand at 251.876 kb on - strand at 251.908 kb on + strand at 251.908 kb on + strand at 251.908 kb on + strand at 251.908 kb on + strand at 251.909 kb on - strand at 251.909 kb on - strand at 251.909 kb on - strand at 251.933 kb on + strand at 251.968 kb on + strand at 251.968 kb on + strand at 251.969 kb on - strand at 251.969 kb on - strand at 251.969 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.5570485 mM remove 249,071 - -0.4 249,071 - +0.6 249,071 - -0.5 249,071 - +1.5 249,208 + AZOBR_RS30705 0.14 -0.3 249,502 + AZOBR_RS30705 0.43 -0.2 249,502 + AZOBR_RS30705 0.43 -0.7 249,503 - AZOBR_RS30705 0.43 +0.1 249,851 - AZOBR_RS30705 0.78 +0.2 249,851 - AZOBR_RS30705 0.78 -0.2 249,992 - -1.1 249,992 - +0.4 249,992 - -0.7 250,062 - -0.0 250,430 + AZOBR_RS30710 0.38 +0.7 250,431 - AZOBR_RS30710 0.38 +0.2 250,431 - AZOBR_RS30710 0.38 +0.3 250,616 + AZOBR_RS30710 0.57 -0.0 250,617 - AZOBR_RS30710 0.57 -0.5 250,691 + AZOBR_RS30710 0.64 +0.1 250,944 + +0.3 250,982 + -0.2 250,982 + -0.2 250,983 - +0.4 250,983 - -0.5 251,180 - +1.3 251,353 + AZOBR_RS30715 0.46 -1.2 251,468 + -0.3 251,468 + -0.4 251,468 + -1.1 251,468 + -0.6 251,469 - -0.2 251,616 + -1.4 251,616 + -1.6 251,617 - +0.0 251,686 + +1.1 251,848 - +0.5 251,848 - +0.1 251,848 - +1.1 251,851 + -1.0 251,851 + -1.4 251,852 - -1.1 251,876 - +0.4 251,908 + +0.9 251,908 + -0.5 251,908 + -0.3 251,908 + -2.3 251,909 - +0.7 251,909 - +0.1 251,909 - +0.8 251,933 + +0.0 251,968 + -0.4 251,968 + +0.3 251,969 - +0.2 251,969 - +0.5 251,969 - +0.0
Or see this region's nucleotide sequence