Experiment: 6-Pentyl-2H-pyran-2-one 0.5570485 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29615 and AZOBR_RS29620 are separated by 11 nucleotides AZOBR_RS29620 and AZOBR_RS29625 are separated by 114 nucleotides AZOBR_RS29625 and AZOBR_RS29630 are separated by 121 nucleotides
AZOBR_RS29615: AZOBR_RS29615 - arginine ABC transporter ATP-binding protein, at 773,996 to 774,751
_RS29615
AZOBR_RS29620: AZOBR_RS29620 - cyclohexadienyl dehydratase precursor, at 774,763 to 775,602
_RS29620
AZOBR_RS29625: AZOBR_RS29625 - agmatinase, at 775,717 to 776,787
_RS29625
AZOBR_RS29630: AZOBR_RS29630 - amidase hydantoinase/carbamoylase family, at 776,909 to 778,102
_RS29630
Position (kb) 775
776
777 Strain fitness (log2 ratio) -1
0
1 at 774.890 kb on - strand, within AZOBR_RS29620 at 774.890 kb on - strand, within AZOBR_RS29620 at 774.949 kb on + strand, within AZOBR_RS29620 at 774.949 kb on + strand, within AZOBR_RS29620 at 774.949 kb on + strand, within AZOBR_RS29620 at 774.950 kb on - strand, within AZOBR_RS29620 at 774.950 kb on - strand, within AZOBR_RS29620 at 774.950 kb on - strand, within AZOBR_RS29620 at 774.950 kb on - strand, within AZOBR_RS29620 at 774.950 kb on - strand, within AZOBR_RS29620 at 775.126 kb on + strand, within AZOBR_RS29620 at 775.127 kb on - strand, within AZOBR_RS29620 at 775.127 kb on - strand, within AZOBR_RS29620 at 775.127 kb on - strand, within AZOBR_RS29620 at 775.537 kb on + strand at 775.537 kb on + strand at 775.537 kb on + strand at 775.537 kb on + strand at 775.537 kb on + strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.538 kb on - strand at 775.556 kb on - strand at 775.822 kb on + strand at 775.823 kb on - strand at 775.903 kb on + strand, within AZOBR_RS29625 at 775.903 kb on + strand, within AZOBR_RS29625 at 775.904 kb on - strand, within AZOBR_RS29625 at 775.904 kb on - strand, within AZOBR_RS29625 at 775.904 kb on - strand, within AZOBR_RS29625 at 775.981 kb on + strand, within AZOBR_RS29625 at 775.981 kb on + strand, within AZOBR_RS29625 at 775.982 kb on - strand, within AZOBR_RS29625 at 776.033 kb on - strand, within AZOBR_RS29625 at 776.065 kb on + strand, within AZOBR_RS29625 at 776.065 kb on + strand, within AZOBR_RS29625 at 776.066 kb on - strand, within AZOBR_RS29625 at 776.185 kb on + strand, within AZOBR_RS29625 at 776.186 kb on - strand, within AZOBR_RS29625 at 776.347 kb on + strand, within AZOBR_RS29625 at 776.347 kb on + strand, within AZOBR_RS29625 at 776.347 kb on + strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.417 kb on - strand, within AZOBR_RS29625 at 776.417 kb on - strand, within AZOBR_RS29625 at 776.507 kb on - strand, within AZOBR_RS29625 at 776.527 kb on + strand, within AZOBR_RS29625 at 776.527 kb on + strand, within AZOBR_RS29625 at 776.528 kb on - strand, within AZOBR_RS29625 at 776.620 kb on + strand, within AZOBR_RS29625 at 776.620 kb on + strand, within AZOBR_RS29625 at 776.620 kb on + strand, within AZOBR_RS29625 at 776.621 kb on - strand, within AZOBR_RS29625 at 776.710 kb on + strand at 776.710 kb on + strand at 776.726 kb on - strand at 776.737 kb on + strand at 776.737 kb on + strand at 776.737 kb on + strand at 776.738 kb on - strand at 776.738 kb on - strand at 776.738 kb on - strand at 776.851 kb on + strand at 776.851 kb on + strand at 776.851 kb on + strand at 776.851 kb on + strand at 776.852 kb on - strand at 777.093 kb on - strand, within AZOBR_RS29630 at 777.590 kb on + strand, within AZOBR_RS29630
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.5570485 mM remove 774,890 - AZOBR_RS29620 0.15 -0.6 774,890 - AZOBR_RS29620 0.15 -1.3 774,949 + AZOBR_RS29620 0.22 -0.8 774,949 + AZOBR_RS29620 0.22 -0.0 774,949 + AZOBR_RS29620 0.22 -0.9 774,950 - AZOBR_RS29620 0.22 +0.1 774,950 - AZOBR_RS29620 0.22 +0.2 774,950 - AZOBR_RS29620 0.22 -0.9 774,950 - AZOBR_RS29620 0.22 +0.2 774,950 - AZOBR_RS29620 0.22 -0.6 775,126 + AZOBR_RS29620 0.43 -0.6 775,127 - AZOBR_RS29620 0.43 +0.5 775,127 - AZOBR_RS29620 0.43 +0.6 775,127 - AZOBR_RS29620 0.43 -0.5 775,537 + -0.4 775,537 + -0.0 775,537 + +0.2 775,537 + -0.4 775,537 + -0.1 775,538 - +0.4 775,538 - -0.5 775,538 - +0.1 775,538 - -0.3 775,538 - +0.1 775,538 - -0.3 775,538 - +0.4 775,538 - +0.2 775,538 - -0.3 775,538 - +0.2 775,538 - -0.7 775,538 - +0.7 775,538 - +0.8 775,556 - +0.1 775,822 + -0.2 775,823 - -1.2 775,903 + AZOBR_RS29625 0.17 -0.2 775,903 + AZOBR_RS29625 0.17 -0.6 775,904 - AZOBR_RS29625 0.17 +0.1 775,904 - AZOBR_RS29625 0.17 -0.7 775,904 - AZOBR_RS29625 0.17 -0.4 775,981 + AZOBR_RS29625 0.25 -0.7 775,981 + AZOBR_RS29625 0.25 -0.4 775,982 - AZOBR_RS29625 0.25 +0.6 776,033 - AZOBR_RS29625 0.30 -0.7 776,065 + AZOBR_RS29625 0.32 +0.6 776,065 + AZOBR_RS29625 0.32 -1.0 776,066 - AZOBR_RS29625 0.33 -0.5 776,185 + AZOBR_RS29625 0.44 +0.4 776,186 - AZOBR_RS29625 0.44 +0.1 776,347 + AZOBR_RS29625 0.59 -0.5 776,347 + AZOBR_RS29625 0.59 +0.0 776,347 + AZOBR_RS29625 0.59 +0.2 776,348 - AZOBR_RS29625 0.59 +0.5 776,348 - AZOBR_RS29625 0.59 +0.9 776,348 - AZOBR_RS29625 0.59 -1.1 776,348 - AZOBR_RS29625 0.59 -0.2 776,348 - AZOBR_RS29625 0.59 -0.3 776,417 - AZOBR_RS29625 0.65 -0.4 776,417 - AZOBR_RS29625 0.65 +0.5 776,507 - AZOBR_RS29625 0.74 -0.3 776,527 + AZOBR_RS29625 0.76 -0.7 776,527 + AZOBR_RS29625 0.76 -0.2 776,528 - AZOBR_RS29625 0.76 +0.5 776,620 + AZOBR_RS29625 0.84 -0.5 776,620 + AZOBR_RS29625 0.84 +0.1 776,620 + AZOBR_RS29625 0.84 +0.1 776,621 - AZOBR_RS29625 0.84 +1.2 776,710 + -0.1 776,710 + +0.3 776,726 - -0.3 776,737 + -0.5 776,737 + -0.1 776,737 + +0.3 776,738 - -0.7 776,738 - -0.5 776,738 - -0.1 776,851 + +0.7 776,851 + -0.3 776,851 + -0.5 776,851 + +0.3 776,852 - -0.4 777,093 - AZOBR_RS29630 0.15 -1.2 777,590 + AZOBR_RS29630 0.57 -1.0
Or see this region's nucleotide sequence