Experiment: 6-Pentyl-2H-pyran-2-one 0.5570485 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28120 and AZOBR_RS28125 are separated by 44 nucleotides AZOBR_RS28125 and AZOBR_RS28130 are separated by 302 nucleotides
AZOBR_RS28120: AZOBR_RS28120 - CoA transferase, at 480,224 to 481,405
_RS28120
AZOBR_RS28125: AZOBR_RS28125 - 3-carboxy-cis cis-muconate cycloisomerase, at 481,450 to 482,811
_RS28125
AZOBR_RS28130: AZOBR_RS28130 - pyridine nucleotide-disulfide oxidoreductase, at 483,114 to 484,367
_RS28130
Position (kb) 481
482
483 Strain fitness (log2 ratio) -2
-1
0
1 at 480.545 kb on + strand, within AZOBR_RS28120 at 480.545 kb on + strand, within AZOBR_RS28120 at 480.635 kb on + strand, within AZOBR_RS28120 at 480.740 kb on + strand, within AZOBR_RS28120 at 480.740 kb on + strand, within AZOBR_RS28120 at 480.741 kb on - strand, within AZOBR_RS28120 at 480.741 kb on - strand, within AZOBR_RS28120 at 480.741 kb on - strand, within AZOBR_RS28120 at 480.741 kb on - strand, within AZOBR_RS28120 at 480.741 kb on - strand, within AZOBR_RS28120 at 480.747 kb on - strand, within AZOBR_RS28120 at 480.854 kb on + strand, within AZOBR_RS28120 at 480.857 kb on + strand, within AZOBR_RS28120 at 480.857 kb on + strand, within AZOBR_RS28120 at 480.857 kb on + strand, within AZOBR_RS28120 at 480.858 kb on - strand, within AZOBR_RS28120 at 480.858 kb on - strand, within AZOBR_RS28120 at 480.858 kb on - strand, within AZOBR_RS28120 at 481.279 kb on - strand, within AZOBR_RS28120 at 481.279 kb on - strand, within AZOBR_RS28120 at 481.279 kb on - strand, within AZOBR_RS28120 at 481.359 kb on - strand at 481.546 kb on + strand at 481.547 kb on - strand at 481.547 kb on - strand at 482.251 kb on + strand, within AZOBR_RS28125 at 482.620 kb on + strand, within AZOBR_RS28125 at 482.743 kb on + strand at 482.743 kb on + strand at 482.743 kb on + strand at 483.188 kb on + strand at 483.189 kb on - strand at 483.215 kb on + strand at 483.215 kb on + strand at 483.216 kb on - strand at 483.216 kb on - strand at 483.216 kb on - strand at 483.271 kb on + strand, within AZOBR_RS28130 at 483.271 kb on + strand, within AZOBR_RS28130 at 483.271 kb on + strand, within AZOBR_RS28130 at 483.272 kb on - strand, within AZOBR_RS28130 at 483.365 kb on - strand, within AZOBR_RS28130 at 483.365 kb on - strand, within AZOBR_RS28130 at 483.766 kb on + strand, within AZOBR_RS28130 at 483.767 kb on - strand, within AZOBR_RS28130
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.5570485 mM remove 480,545 + AZOBR_RS28120 0.27 +1.3 480,545 + AZOBR_RS28120 0.27 +1.5 480,635 + AZOBR_RS28120 0.35 -0.7 480,740 + AZOBR_RS28120 0.44 -1.5 480,740 + AZOBR_RS28120 0.44 -1.8 480,741 - AZOBR_RS28120 0.44 -0.6 480,741 - AZOBR_RS28120 0.44 -0.9 480,741 - AZOBR_RS28120 0.44 -0.1 480,741 - AZOBR_RS28120 0.44 -0.1 480,741 - AZOBR_RS28120 0.44 -0.2 480,747 - AZOBR_RS28120 0.44 -0.8 480,854 + AZOBR_RS28120 0.53 +0.2 480,857 + AZOBR_RS28120 0.54 +0.6 480,857 + AZOBR_RS28120 0.54 -1.7 480,857 + AZOBR_RS28120 0.54 -0.2 480,858 - AZOBR_RS28120 0.54 +0.1 480,858 - AZOBR_RS28120 0.54 -0.7 480,858 - AZOBR_RS28120 0.54 -0.1 481,279 - AZOBR_RS28120 0.89 -0.7 481,279 - AZOBR_RS28120 0.89 -1.0 481,279 - AZOBR_RS28120 0.89 +0.2 481,359 - -0.4 481,546 + -0.9 481,547 - +0.4 481,547 - -0.1 482,251 + AZOBR_RS28125 0.59 -0.7 482,620 + AZOBR_RS28125 0.86 -1.4 482,743 + -0.4 482,743 + -0.7 482,743 + -0.2 483,188 + +0.2 483,189 - -0.0 483,215 + +0.4 483,215 + +0.1 483,216 - -0.1 483,216 - -0.6 483,216 - +0.1 483,271 + AZOBR_RS28130 0.13 -0.1 483,271 + AZOBR_RS28130 0.13 +0.0 483,271 + AZOBR_RS28130 0.13 +0.0 483,272 - AZOBR_RS28130 0.13 +0.3 483,365 - AZOBR_RS28130 0.20 -0.0 483,365 - AZOBR_RS28130 0.20 +0.1 483,766 + AZOBR_RS28130 0.52 -0.2 483,767 - AZOBR_RS28130 0.52 -0.4
Or see this region's nucleotide sequence