Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09735

Experiment: phage 31.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage 31.1
2,126,567	+		LRK54_RS09725	0.63	-2.7
2,126,568	-		LRK54_RS09725	0.64	-0.3
2,126,811	+				+1.3
2,126,812	-				+0.4
2,126,812	-				+0.6
2,126,812	-				+0.6
2,126,835	+				+0.3
2,126,836	-				+1.0
2,127,165	+		LRK54_RS09730	0.55	-2.1
2,127,165	+		LRK54_RS09730	0.55	-1.7
2,127,166	-		LRK54_RS09730	0.55	-2.5
2,127,336	+		LRK54_RS09730	0.79	-0.9
2,127,336	+		LRK54_RS09730	0.79	-1.0
2,127,336	+		LRK54_RS09730	0.79	+0.3
2,127,336	+		LRK54_RS09730	0.79	-0.4
2,127,336	+		LRK54_RS09730	0.79	+1.0
2,127,337	-		LRK54_RS09730	0.79	-0.3
2,127,337	-		LRK54_RS09730	0.79	-1.9
2,127,337	-		LRK54_RS09730	0.79	+1.3
2,127,337	-		LRK54_RS09730	0.79	-1.2
2,127,337	-		LRK54_RS09730	0.79	+1.8
2,127,337	-		LRK54_RS09730	0.79	+0.8
2,127,337	-		LRK54_RS09730	0.79	-0.6
2,127,337	-		LRK54_RS09730	0.79	-0.5
2,127,337	-		LRK54_RS09730	0.79	+2.7
2,127,337	-		LRK54_RS09730	0.79	-1.5
2,127,369	+		LRK54_RS09730	0.83	+0.8
2,127,369	+		LRK54_RS09730	0.83	+1.2
2,127,369	+		LRK54_RS09730	0.83	+0.2
2,127,369	+		LRK54_RS09730	0.83	-1.1
2,127,370	-		LRK54_RS09730	0.83	-0.6
2,127,370	-		LRK54_RS09730	0.83	+2.1
2,127,732	+		LRK54_RS09735	0.82	+0.4
2,127,732	+		LRK54_RS09735	0.82	-0.5
2,127,732	+		LRK54_RS09735	0.82	-1.4
2,127,733	-		LRK54_RS09735	0.83	+0.7
2,127,733	-		LRK54_RS09735	0.83	-1.5
2,127,733	-		LRK54_RS09735	0.83	-1.6
2,127,733	-		LRK54_RS09735	0.83	-2.2
2,127,895	+		LRK54_RS09740	0.12	-0.7
2,127,896	-		LRK54_RS09740	0.12	-1.5
2,127,910	+		LRK54_RS09740	0.13	-1.4
2,127,910	+		LRK54_RS09740	0.13	-0.5
2,127,910	+		LRK54_RS09740	0.13	-0.4
2,127,910	+		LRK54_RS09740	0.13	-0.5
2,127,910	+		LRK54_RS09740	0.13	+1.1
2,127,910	+		LRK54_RS09740	0.13	+0.7
2,127,910	+		LRK54_RS09740	0.13	-0.9
2,127,910	+		LRK54_RS09740	0.13	-0.9
2,127,910	+		LRK54_RS09740	0.13	-0.9
2,127,910	+		LRK54_RS09740	0.13	+0.9
2,127,910	+		LRK54_RS09740	0.13	-0.5
2,127,910	+		LRK54_RS09740	0.13	-0.7
2,127,910	+		LRK54_RS09740	0.13	+0.7
2,127,910	+		LRK54_RS09740	0.13	-0.0
2,127,910	+		LRK54_RS09740	0.13	+0.1
2,127,910	+		LRK54_RS09740	0.13	-2.1
2,127,911	-		LRK54_RS09740	0.13	-0.8
2,127,911	-		LRK54_RS09740	0.13	-2.0
2,127,911	-		LRK54_RS09740	0.13	+0.1
2,127,911	-		LRK54_RS09740	0.13	-0.5
2,127,911	-		LRK54_RS09740	0.13	-0.5
2,127,911	-		LRK54_RS09740	0.13	-1.3
2,127,911	-		LRK54_RS09740	0.13	+0.3
2,127,911	-		LRK54_RS09740	0.13	+0.3
2,127,911	-		LRK54_RS09740	0.13	-3.1
2,127,911	-		LRK54_RS09740	0.13	-2.1
2,127,911	-		LRK54_RS09740	0.13	-2.0
2,127,911	-		LRK54_RS09740	0.13	+0.1
2,127,911	-		LRK54_RS09740	0.13	+0.3
2,127,911	-		LRK54_RS09740	0.13	-1.4
2,127,911	-		LRK54_RS09740	0.13	-0.0
2,127,955	+		LRK54_RS09740	0.18	-2.5
2,127,955	+		LRK54_RS09740	0.18	+1.3
2,127,956	-		LRK54_RS09740	0.18	-0.3
2,127,956	-		LRK54_RS09740	0.18	+0.3
2,127,956	-		LRK54_RS09740	0.18	+1.6
2,127,956	-		LRK54_RS09740	0.18	-2.7
2,127,956	-		LRK54_RS09740	0.18	-1.5
2,128,407	+		LRK54_RS09740	0.65	-1.5
2,128,408	-		LRK54_RS09740	0.65	-0.9
2,128,455	-		LRK54_RS09740	0.70	-0.1
2,128,464	+		LRK54_RS09740	0.71	+0.3
2,128,464	+		LRK54_RS09740	0.71	-0.7
2,128,464	+		LRK54_RS09740	0.71	+0.1
2,128,464	+		LRK54_RS09740	0.71	-1.1
2,128,464	+		LRK54_RS09740	0.71	+1.3
2,128,464	+		LRK54_RS09740	0.71	-0.3
2,128,464	+		LRK54_RS09740	0.71	+2.3
2,128,464	+		LRK54_RS09740	0.71	+0.3
2,128,465	-		LRK54_RS09740	0.71	+2.3
2,128,465	-		LRK54_RS09740	0.71	+0.7
2,128,465	-		LRK54_RS09740	0.71	-0.4
2,128,465	-		LRK54_RS09740	0.71	-0.0
2,128,465	-		LRK54_RS09740	0.71	-1.8
2,128,465	-		LRK54_RS09740	0.71	-0.9
2,128,465	-		LRK54_RS09740	0.71	+4.6
2,128,465	-		LRK54_RS09740	0.71	-2.1
2,128,465	-		LRK54_RS09740	0.71	-1.4
2,128,465	-		LRK54_RS09740	0.71	-3.6
2,128,465	-		LRK54_RS09740	0.71	-2.1
2,128,465	-		LRK54_RS09740	0.71	-1.3
2,128,501	+		LRK54_RS09740	0.75	-1.3
2,128,501	+		LRK54_RS09740	0.75	-0.0
2,128,501	+		LRK54_RS09740	0.75	-0.0
2,128,501	+		LRK54_RS09740	0.75	+1.6
2,128,501	+		LRK54_RS09740	0.75	-0.7
2,128,501	+		LRK54_RS09740	0.75	-2.4
2,128,501	+		LRK54_RS09740	0.75	+0.7
2,128,501	+		LRK54_RS09740	0.75	-2.3
2,128,501	+		LRK54_RS09740	0.75	-1.7
2,128,501	+		LRK54_RS09740	0.75	+0.3
2,128,501	+		LRK54_RS09740	0.75	+1.3
2,128,501	+		LRK54_RS09740	0.75	-0.1
2,128,501	+		LRK54_RS09740	0.75	-0.3
2,128,502	-		LRK54_RS09740	0.75	-0.3
2,128,502	-		LRK54_RS09740	0.75	+3.1
2,128,502	-		LRK54_RS09740	0.75	+0.3
2,128,502	-		LRK54_RS09740	0.75	+0.1
2,128,502	-		LRK54_RS09740	0.75	+2.3
2,128,502	-		LRK54_RS09740	0.75	-0.9
2,128,502	-		LRK54_RS09740	0.75	+1.3
2,128,502	-		LRK54_RS09740	0.75	-0.0
2,128,606	+		LRK54_RS09740	0.85	-1.8
2,128,626	+		LRK54_RS09740	0.87	+1.7
2,128,627	+		LRK54_RS09740	0.88	+0.6
2,128,627	+		LRK54_RS09740	0.88	-1.3
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	+0.3
2,128,627	+		LRK54_RS09740	0.88	-0.9
2,128,627	+		LRK54_RS09740	0.88	+0.3
2,128,627	+		LRK54_RS09740	0.88	+1.3
2,128,627	+		LRK54_RS09740	0.88	-1.5
2,128,627	+		LRK54_RS09740	0.88	-0.9
2,128,627	+		LRK54_RS09740	0.88	-0.0
2,128,627	+		LRK54_RS09740	0.88	-1.9
2,128,627	+		LRK54_RS09740	0.88	-0.0
2,128,627	+		LRK54_RS09740	0.88	+0.4
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	+1.3
2,128,627	+		LRK54_RS09740	0.88	+0.5
2,128,627	+		LRK54_RS09740	0.88	-1.1
2,128,627	+		LRK54_RS09740	0.88	-1.1
2,128,627	+		LRK54_RS09740	0.88	-1.6
2,128,627	+		LRK54_RS09740	0.88	+0.4
2,128,627	+		LRK54_RS09740	0.88	+0.3
2,128,627	+		LRK54_RS09740	0.88	-0.0
2,128,627	+		LRK54_RS09740	0.88	+0.6
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	+2.1
2,128,627	+		LRK54_RS09740	0.88	-2.9
2,128,627	+		LRK54_RS09740	0.88	+0.0
2,128,627	+		LRK54_RS09740	0.88	+0.6
2,128,627	+		LRK54_RS09740	0.88	-1.3
2,128,627	+		LRK54_RS09740	0.88	-0.7
2,128,627	+		LRK54_RS09740	0.88	+1.0
2,128,627	+		LRK54_RS09740	0.88	-1.0
2,128,627	+		LRK54_RS09740	0.88	-1.0
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	+0.7
2,128,627	+		LRK54_RS09740	0.88	+1.1
2,128,627	+		LRK54_RS09740	0.88	+1.7
2,128,627	+		LRK54_RS09740	0.88	-0.0
2,128,627	+		LRK54_RS09740	0.88	+0.7
2,128,628	-		LRK54_RS09740	0.88	+0.5
2,128,628	-		LRK54_RS09740	0.88	-0.9
2,128,628	-		LRK54_RS09740	0.88	-0.9
2,128,628	-		LRK54_RS09740	0.88	+1.8
2,128,628	-		LRK54_RS09740	0.88	-2.0
2,128,628	-		LRK54_RS09740	0.88	+1.2
2,128,628	-		LRK54_RS09740	0.88	+1.2
2,128,628	-		LRK54_RS09740	0.88	+0.3
2,128,628	-		LRK54_RS09740	0.88	-0.5
2,128,628	-		LRK54_RS09740	0.88	+1.3
2,128,628	-		LRK54_RS09740	0.88	-0.9
2,128,628	-		LRK54_RS09740	0.88	-1.9
2,128,628	-		LRK54_RS09740	0.88	-1.2
2,128,628	-		LRK54_RS09740	0.88	+1.3
2,128,628	-		LRK54_RS09740	0.88	-0.0
2,128,628	-		LRK54_RS09740	0.88	-0.0
2,128,628	-		LRK54_RS09740	0.88	-1.1
2,128,628	-		LRK54_RS09740	0.88	-0.7
2,128,628	-		LRK54_RS09740	0.88	-0.0
2,128,628	-		LRK54_RS09740	0.88	-1.9
2,128,628	-		LRK54_RS09740	0.88	-1.4
2,128,628	-		LRK54_RS09740	0.88	+0.3
2,128,628	-		LRK54_RS09740	0.88	+2.3
2,128,628	-		LRK54_RS09740	0.88	+1.3
2,128,628	-		LRK54_RS09740	0.88	+0.9
2,128,628	-		LRK54_RS09740	0.88	+0.5
2,128,628	-		LRK54_RS09740	0.88	+0.3
2,128,628	-		LRK54_RS09740	0.88	-0.0
2,128,628	-		LRK54_RS09740	0.88	+0.4
2,128,628	-		LRK54_RS09740	0.88	-0.3
2,128,628	-		LRK54_RS09740	0.88	+1.3
2,128,628	-		LRK54_RS09740	0.88	-1.9
2,128,628	-		LRK54_RS09740	0.88	-1.1
2,128,628	-		LRK54_RS09740	0.88	-0.6
2,128,628	-		LRK54_RS09740	0.88	-2.0
2,128,628	-		LRK54_RS09740	0.88	-3.0
2,128,628	-		LRK54_RS09740	0.88	-0.9
2,128,628	-		LRK54_RS09740	0.88	-1.6
2,128,628	-		LRK54_RS09740	0.88	+1.3
2,128,628	-		LRK54_RS09740	0.88	+2.3
2,128,628	-		LRK54_RS09740	0.88	-0.5
2,128,628	-		LRK54_RS09740	0.88	-0.3
2,128,628	-		LRK54_RS09740	0.88	-3.2
2,128,645	+		LRK54_RS09740	0.89	+2.0
2,128,645	+		LRK54_RS09740	0.89	+0.4
2,128,646	-		LRK54_RS09740	0.90	+0.3
2,128,646	-		LRK54_RS09740	0.90	-0.4
2,128,646	-		LRK54_RS09740	0.90	-1.0
2,128,646	-		LRK54_RS09740	0.90	-2.6
2,128,646	-		LRK54_RS09740	0.90	+0.7
2,128,646	-		LRK54_RS09740	0.90	+1.7
2,128,663	+				-1.2
2,128,663	+				-1.4
2,128,663	+				-0.0
2,128,663	+				-2.4
2,128,663	+				-0.6
2,128,663	+				-1.0
2,128,664	-				+1.3
2,128,664	-				+2.7
2,128,664	-				+0.3
2,128,664	-				+2.3
2,128,664	-				-0.1
2,128,664	-				-1.5
2,128,664	-				+1.9
2,128,664	-				+1.3
2,128,664	-				-0.3
2,128,664	-				+2.3