Strain Fitness in Marinobacter adhaerens HP15 around HP15_65

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
68,136	+		HP15_64	0.26	+1.0
68,167	+		HP15_64	0.29	-1.3
68,167	+		HP15_64	0.29	+2.0
68,167	+		HP15_64	0.29	+1.2
68,167	+		HP15_64	0.29	+1.8
68,167	+		HP15_64	0.29	-0.3
68,175	-		HP15_64	0.29	-0.1
68,175	-		HP15_64	0.29	-0.1
68,175	-		HP15_64	0.29	+1.5
68,175	-		HP15_64	0.29	-0.8
68,264	+		HP15_64	0.36	-1.3
68,370	-		HP15_64	0.44	+0.4
68,577	-		HP15_64	0.60	+2.5
68,686	+		HP15_64	0.69	-1.4
68,696	+		HP15_64	0.70	+0.9
68,702	+		HP15_64	0.70	+0.8
68,702	+		HP15_64	0.70	-0.4
68,702	+		HP15_64	0.70	-0.4
68,717	+		HP15_64	0.71	-1.9
68,736	+		HP15_64	0.73	+0.1
68,752	-		HP15_64	0.74	-0.8
68,757	+		HP15_64	0.74	-1.1
68,762	+		HP15_64	0.75	-0.6
68,762	-		HP15_64	0.75	-0.4
68,762	-		HP15_64	0.75	-1.3
68,762	-		HP15_64	0.75	-0.7
68,762	-		HP15_64	0.75	+0.3
68,762	-		HP15_64	0.75	+0.5
68,762	-		HP15_64	0.75	-1.2
68,775	-		HP15_64	0.76	+2.5
68,776	+		HP15_64	0.76	-1.2
68,776	+		HP15_64	0.76	+0.5
68,776	+		HP15_64	0.76	-1.9
68,776	+		HP15_64	0.76	-0.7
68,776	+		HP15_64	0.76	+0.5
68,776	+		HP15_64	0.76	-2.3
68,780	-		HP15_64	0.76	+2.1
68,784	-		HP15_64	0.76	+1.8
68,784	-		HP15_64	0.76	+1.6
68,784	-		HP15_64	0.76	-1.1
68,784	-		HP15_64	0.76	+2.8
68,794	+		HP15_64	0.77	-0.2
68,881	+		HP15_64	0.84	+0.2
68,929	+		HP15_64	0.87	+1.4
68,936	+		HP15_64	0.88	+0.7
68,969	+				+0.0
69,021	-				+1.4
69,046	+				+0.4
69,099	+				-1.0
69,129	-				-0.0
69,165	+				-1.2
69,176	-				-1.6
69,187	-				-0.9
69,207	-				+0.9
69,282	+		HP15_65	0.14	-1.8
69,282	+		HP15_65	0.14	-1.4
69,290	-		HP15_65	0.15	-1.8
69,353	-		HP15_65	0.19	+0.0
69,401	-		HP15_65	0.23	+0.3
69,440	-		HP15_65	0.25	-3.0
69,478	+		HP15_65	0.28	-1.3
69,541	-		HP15_65	0.33	+0.2
69,595	+		HP15_65	0.37	+0.6
69,595	-		HP15_65	0.37	+1.4
69,613	-		HP15_65	0.38	-0.4
69,625	-		HP15_65	0.39	+0.4
69,651	-		HP15_65	0.41	+2.7
69,652	+		HP15_65	0.41	-0.7
69,720	+		HP15_65	0.46	+0.0
69,728	-		HP15_65	0.46	+2.7
69,775	-		HP15_65	0.50	-0.4
69,775	-		HP15_65	0.50	-2.8
69,815	-		HP15_65	0.52	+0.5
69,842	+		HP15_65	0.54	+0.1
69,843	+		HP15_65	0.54	-2.1
69,852	-		HP15_65	0.55	-2.2
69,913	+		HP15_65	0.60	-0.1
69,921	-		HP15_65	0.60	+4.8
69,945	+		HP15_65	0.62	-1.8
69,945	+		HP15_65	0.62	-1.8
69,945	+		HP15_65	0.62	-1.4
69,962	+		HP15_65	0.63	-1.4
70,044	-		HP15_65	0.69	-0.7
70,069	+		HP15_65	0.71	+0.9
70,076	-		HP15_65	0.71	-0.1
70,133	+		HP15_65	0.75	+1.8
70,178	-		HP15_65	0.79	-0.2
70,179	+		HP15_65	0.79	-0.5
70,179	+		HP15_65	0.79	-0.2
70,223	-		HP15_65	0.82	-1.0
70,228	-		HP15_65	0.82	-0.8
70,266	+		HP15_65	0.85	-1.9
70,527	-				+2.4
70,527	-				-1.0
70,557	-				+1.7
70,637	+				-0.9
70,645	-				+1.1
70,753	-				+1.3
70,758	-				+1.7
70,765	+				-1.1
70,923	-				-1.7
71,050	-		HP15_66	0.18	+1.2
71,079	-		HP15_66	0.20	-1.3
71,121	+		HP15_66	0.23	-0.1
71,126	+		HP15_66	0.24	-0.6
71,188	-		HP15_66	0.28	+2.8
71,222	-		HP15_66	0.31	-0.2
71,236	+		HP15_66	0.32	-0.1
71,303	+		HP15_66	0.36	+2.0
71,328	+		HP15_66	0.38	+1.3
71,335	-		HP15_66	0.39	-0.4
71,335	-		HP15_66	0.39	-0.7
71,352	+		HP15_66	0.40	+0.4
71,386	+		HP15_66	0.42	-0.3
71,423	+		HP15_66	0.45	-0.2
71,446	-		HP15_66	0.47	-1.6