Strain Fitness in Marinobacter adhaerens HP15 around HP15_53

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
57,299	-		HP15_52	0.32	+1.1
57,351	-		HP15_52	0.36	-0.6
57,383	+		HP15_52	0.39	-0.0
57,476	+		HP15_52	0.46	-0.0
57,486	+		HP15_52	0.47	+2.2
57,539	+		HP15_52	0.51	+0.7
57,547	-		HP15_52	0.51	+0.7
57,575	-		HP15_52	0.54	-0.0
57,668	+		HP15_52	0.61	-0.0
57,671	+		HP15_52	0.61	+1.2
57,697	-		HP15_52	0.63	-0.2
57,730	+		HP15_52	0.65	-0.5
57,732	-		HP15_52	0.66	+0.0
57,738	-		HP15_52	0.66	-0.1
57,738	-		HP15_52	0.66	-1.3
57,866	-		HP15_52	0.76	-0.4
57,913	+		HP15_52	0.79	+0.5
57,922	-		HP15_52	0.80	+1.8
57,924	+		HP15_52	0.80	+0.0
57,932	-		HP15_52	0.81	-0.0
57,932	-		HP15_52	0.81	-0.8
57,932	-		HP15_52	0.81	+1.8
57,932	-		HP15_52	0.81	-1.0
57,948	+		HP15_52	0.82	+1.2
57,966	+		HP15_52	0.83	-1.5
57,966	+		HP15_52	0.83	+1.9
57,966	+		HP15_52	0.83	+0.3
57,966	+		HP15_52	0.83	-0.9
57,966	+		HP15_52	0.83	-0.0
57,989	+		HP15_52	0.85	+1.4
57,995	-		HP15_52	0.86	+0.1
57,997	-		HP15_52	0.86	+1.1
58,037	-		HP15_52	0.89	+1.7
58,056	-				+2.1
58,067	-				+1.5
58,091	+				+3.4
58,199	+				+1.3
58,199	-				-0.9
58,225	-				-0.4
58,236	+				+0.5
58,317	+				-1.5
58,333	-				+0.8
58,350	-				+1.2
58,385	-				+0.6
58,412	-		HP15_53	0.10	+0.5
58,468	+		HP15_53	0.15	+1.2
58,474	+		HP15_53	0.16	+2.7
58,497	-		HP15_53	0.18	-0.3
58,548	-		HP15_53	0.22	-1.1
58,576	-		HP15_53	0.25	+1.2
58,685	-		HP15_53	0.34	+1.2
58,717	-		HP15_53	0.37	-0.8
58,745	+		HP15_53	0.39	+1.0
58,793	+		HP15_53	0.43	+0.2
58,804	+		HP15_53	0.44	+3.3
58,819	+		HP15_53	0.46	+2.4
58,819	+		HP15_53	0.46	+0.6
58,819	+		HP15_53	0.46	+2.9
58,932	-		HP15_53	0.56	+0.1
58,932	-		HP15_53	0.56	-0.1
58,932	-		HP15_53	0.56	+0.3
59,001	+		HP15_53	0.62	+0.0
59,022	-		HP15_53	0.63	-1.6
59,080	+		HP15_53	0.68	+1.4
59,080	+		HP15_53	0.68	-0.6
59,080	+		HP15_53	0.68	+0.4
59,080	+		HP15_53	0.68	+0.6
59,080	+		HP15_53	0.68	+1.7
59,088	-		HP15_53	0.69	-0.6
59,158	+		HP15_53	0.75	+2.2
59,166	-		HP15_53	0.76	+0.5
59,241	+		HP15_53	0.82	+2.4
59,259	-		HP15_53	0.84	-1.7
59,322	-		HP15_53	0.89	+0.7
59,322	-		HP15_53	0.89	+0.2
59,324	+		HP15_53	0.90	+0.2
59,326	-		HP15_53	0.90	-0.7
59,334	+				-1.0
59,334	+				+1.4
59,342	-				-1.1
59,342	-				-2.0
59,379	-				-2.0
59,495	-				-1.3
59,498	-				+1.6
59,513	+				+0.0
59,513	-				-1.3
59,521	-				+0.7
59,521	-				-2.8
59,570	-		HP15_54	0.12	-0.3
59,580	-		HP15_54	0.13	-1.1
59,622	-		HP15_54	0.17	+0.1
59,732	-		HP15_54	0.27	-0.4
59,794	+		HP15_54	0.33	+2.1
59,851	-		HP15_54	0.39	+1.6
59,880	-		HP15_54	0.41	-1.1
59,880	-		HP15_54	0.41	+1.1
59,885	+		HP15_54	0.42	-0.8
59,885	+		HP15_54	0.42	-0.2
59,894	+		HP15_54	0.43	-1.0
59,902	-		HP15_54	0.43	+0.8
60,035	+		HP15_54	0.56	+2.7
60,068	-		HP15_54	0.59	-0.2
60,137	-		HP15_54	0.66	+0.9
60,147	-		HP15_54	0.66	+1.8
60,174	-		HP15_54	0.69	+0.9
60,183	-		HP15_54	0.70	-0.2
60,228	-		HP15_54	0.74	-0.8
60,228	-		HP15_54	0.74	-0.4
60,270	-		HP15_54	0.78	-1.3
60,328	-		HP15_54	0.84	+1.8
60,330	+		HP15_54	0.84	-0.9
60,332	+		HP15_54	0.84	+3.2
60,337	+		HP15_54	0.84	-0.3
60,338	-		HP15_54	0.85	+0.7
60,338	-		HP15_54	0.85	-0.1
60,369	+		HP15_54	0.87	+1.9
60,397	-				+1.8
60,439	-				-2.0