Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g100

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
93,530	-		HP15_p187g99	0.38	+1.0
93,712	+		HP15_p187g99	0.52	-0.1
93,720	-		HP15_p187g99	0.53	+1.2
93,752	-		HP15_p187g99	0.55	+0.7
93,792	-		HP15_p187g99	0.58	+1.8
93,792	-		HP15_p187g99	0.58	+1.5
93,801	+		HP15_p187g99	0.59	+0.9
93,801	+		HP15_p187g99	0.59	+0.9
93,801	+		HP15_p187g99	0.59	+1.3
93,809	-		HP15_p187g99	0.59	+2.2
93,809	-		HP15_p187g99	0.59	+2.6
93,814	-		HP15_p187g99	0.60	+1.5
93,816	+		HP15_p187g99	0.60	+1.3
93,824	+		HP15_p187g99	0.61	+2.0
93,824	+		HP15_p187g99	0.61	+1.7
93,824	+		HP15_p187g99	0.61	+0.5
93,832	-		HP15_p187g99	0.61	+0.8
93,832	-		HP15_p187g99	0.61	-0.5
93,832	-		HP15_p187g99	0.61	+1.4
93,837	-		HP15_p187g99	0.62	+0.2
93,852	+		HP15_p187g99	0.63	-0.9
93,869	+		HP15_p187g99	0.64	+0.1
93,870	-		HP15_p187g99	0.64	+1.4
93,890	+		HP15_p187g99	0.66	+0.8
93,935	-		HP15_p187g99	0.69	+1.1
93,945	+		HP15_p187g99	0.70	-1.0
93,959	+		HP15_p187g99	0.71	+0.2
93,965	+		HP15_p187g99	0.71	+1.9
93,972	-		HP15_p187g99	0.72	-0.6
93,973	-		HP15_p187g99	0.72	-0.5
94,007	-		HP15_p187g99	0.75	-0.1
94,009	-		HP15_p187g99	0.75	+0.3
94,013	+		HP15_p187g99	0.75	+2.2
94,021	-		HP15_p187g99	0.76	-0.4
94,038	-		HP15_p187g99	0.77	-0.1
94,120	+		HP15_p187g99	0.83	-0.2
94,133	-		HP15_p187g99	0.84	+0.2
94,135	-		HP15_p187g99	0.84	+1.6
94,135	-		HP15_p187g99	0.84	+1.0
94,142	+		HP15_p187g99	0.85	+1.1
94,169	-		HP15_p187g99	0.87	-0.1
94,171	-		HP15_p187g99	0.87	+1.8
94,174	+		HP15_p187g99	0.87	+1.8
94,182	-		HP15_p187g99	0.88	+1.4
94,182	-		HP15_p187g99	0.88	+0.8
94,231	+				+1.9
94,239	-				+0.2
94,245	-				+1.9
94,247	+				+2.2
94,317	+				-0.4
94,325	-				-0.8
94,325	-				-0.5
94,325	-				+2.5
94,365	-				-1.1
94,416	+				-0.7
94,456	-				-0.6
94,497	+				-0.5
94,558	+				-0.3
94,559	+				-1.7
94,582	+		HP15_p187g100	0.12	-2.7
94,603	+		HP15_p187g100	0.16	+0.4
94,611	-		HP15_p187g100	0.18	+1.0
94,656	+		HP15_p187g100	0.25	-0.4
94,668	+		HP15_p187g100	0.28	-0.7
94,668	+		HP15_p187g100	0.28	-0.3
94,668	+		HP15_p187g100	0.28	+0.2
94,676	-		HP15_p187g100	0.29	-1.7
94,676	-		HP15_p187g100	0.29	+2.2
94,717	+		HP15_p187g100	0.36	-0.9
94,719	+		HP15_p187g100	0.36	-0.8
94,719	+		HP15_p187g100	0.36	-0.6
94,719	+		HP15_p187g100	0.36	+1.9
94,719	+		HP15_p187g100	0.36	-0.5
94,719	+		HP15_p187g100	0.36	+0.8
94,727	-		HP15_p187g100	0.38	+2.4
94,727	-		HP15_p187g100	0.38	-1.0
94,753	+		HP15_p187g100	0.42	-0.2
94,769	-		HP15_p187g100	0.45	-0.7
94,784	+		HP15_p187g100	0.48	+1.7
94,792	-		HP15_p187g100	0.49	-0.4
94,835	+		HP15_p187g100	0.57	+1.4
94,841	+		HP15_p187g100	0.58	+1.8
94,849	-		HP15_p187g100	0.59	-3.1
94,863	-		HP15_p187g100	0.62	+2.0
94,894	-		HP15_p187g100	0.67	-0.3
94,934	+		HP15_p187g100	0.74	+0.2
94,944	+		HP15_p187g100	0.76	-0.1
94,975	+		HP15_p187g100	0.81	-1.7
94,983	+		HP15_p187g100	0.83	+0.7
94,983	+		HP15_p187g100	0.83	+2.0
94,991	-		HP15_p187g100	0.84	-0.8
94,991	-		HP15_p187g100	0.84	+1.7
94,991	-		HP15_p187g100	0.84	-0.5
94,991	-		HP15_p187g100	0.84	-0.5
94,991	-		HP15_p187g100	0.84	-0.4
94,991	-		HP15_p187g100	0.84	-0.8
94,991	-		HP15_p187g100	0.84	-0.5
95,015	+		HP15_p187g100	0.88	-1.6
95,020	+		HP15_p187g100	0.89	-0.7
95,049	+				-2.5
95,057	-				-0.6
95,057	-				+0.9
95,057	-				+0.6
95,115	+				+1.4
95,116	+				-1.0
95,121	+				+1.4
95,121	+				+1.8
95,129	+				+0.1
95,140	+				+2.2
95,142	+				+0.3
95,148	-				-3.1
95,148	-				+0.7
95,150	-		HP15_p187g101	0.10	+1.6
95,186	+		HP15_p187g101	0.15	-0.8
95,236	+		HP15_p187g101	0.22	+0.9
95,246	+		HP15_p187g101	0.23	-1.1
95,277	-		HP15_p187g101	0.27	+1.6
95,317	+		HP15_p187g101	0.33	-1.6
95,334	-		HP15_p187g101	0.35	-0.8
95,334	-		HP15_p187g101	0.35	+0.0
95,363	-		HP15_p187g101	0.39	+2.2
95,382	+		HP15_p187g101	0.42	-1.1
95,436	-		HP15_p187g101	0.49	-1.5
95,492	+		HP15_p187g101	0.57	+1.4
95,501	-		HP15_p187g101	0.58	+1.2
95,512	+		HP15_p187g101	0.60	-0.2
95,586	-		HP15_p187g101	0.70	-2.4
95,691	-		HP15_p187g101	0.84	+0.8
95,691	-		HP15_p187g101	0.84	+0.3
95,693	+		HP15_p187g101	0.84	-1.9
95,693	+		HP15_p187g101	0.84	-2.3
95,693	+		HP15_p187g101	0.84	-2.0
95,693	+		HP15_p187g101	0.84	+1.2
95,701	-		HP15_p187g101	0.86	-2.2
95,731	-		HP15_p187g101	0.90	+2.8
95,793	-				-0.3
95,865	+				-0.8
95,873	-				-0.3
95,873	-				-0.1
95,916	+				+1.0
95,958	-				-0.6
95,965	+				-2.2
96,013	+				+1.6
96,042	-				+1.2
96,047	+				+0.6
96,067	+		HP15_p187g102	0.10	+1.1
96,076	-		HP15_p187g102	0.11	-0.9
96,077	+		HP15_p187g102	0.11	+1.3