Strain Fitness in Marinobacter adhaerens HP15 around HP15_4175

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,412,374	+		HP15_4174	0.67	+0.0
4,412,391	+		HP15_4174	0.67	+0.7
4,412,392	+		HP15_4174	0.67	+0.7
4,412,392	+		HP15_4174	0.67	+1.1
4,412,549	-		HP15_4174	0.73	+0.5
4,412,549	-		HP15_4174	0.73	-0.8
4,412,721	-		HP15_4174	0.79	-0.7
4,412,813	-		HP15_4174	0.82	-0.0
4,412,814	-		HP15_4174	0.82	+0.0
4,412,814	-		HP15_4174	0.82	+2.1
4,413,006	+		HP15_4174	0.89	+0.9
4,413,014	-		HP15_4174	0.89	+2.5
4,413,016	+		HP15_4174	0.89	+1.3
4,413,024	-		HP15_4174	0.89	-0.7
4,413,042	-		HP15_4174	0.90	+0.0
4,413,060	-				-0.6
4,413,065	-				-1.5
4,413,098	+				+1.4
4,413,103	+				+0.2
4,413,111	-				+2.0
4,413,111	-				+1.7
4,413,115	-				+1.0
4,413,116	-				-0.2
4,413,126	-				-0.1
4,413,162	+				+0.5
4,413,199	-				-0.5
4,413,258	-				+1.4
4,413,309	-				-1.2
4,413,341	-				+0.5
4,413,346	+				-0.9
4,413,360	-				-0.1
4,413,433	-		HP15_4175	0.13	-0.2
4,413,562	-		HP15_4175	0.28	+1.5
4,413,681	-		HP15_4175	0.42	-0.4
4,413,692	-		HP15_4175	0.44	+1.1
4,413,714	+		HP15_4175	0.46	+0.0
4,413,714	+		HP15_4175	0.46	-0.9
4,413,734	+		HP15_4175	0.49	+1.3
4,413,759	-		HP15_4175	0.51	-0.8
4,413,760	-		HP15_4175	0.52	+1.4
4,413,812	+		HP15_4175	0.58	+1.0
4,413,812	+		HP15_4175	0.58	-0.6
4,413,820	-		HP15_4175	0.59	-1.0
4,413,820	-		HP15_4175	0.59	-0.9
4,413,853	+		HP15_4175	0.62	-0.8
4,413,878	-		HP15_4175	0.65	-0.7
4,413,925	+		HP15_4175	0.71	+1.3
4,413,926	-		HP15_4175	0.71	-0.8
4,413,968	-		HP15_4175	0.76	-0.9
4,414,006	-		HP15_4175	0.80	+0.8
4,414,013	+		HP15_4175	0.81	+0.1
4,414,024	+		HP15_4175	0.82	-0.0
4,414,047	-		HP15_4175	0.85	+0.9
4,414,081	+		HP15_4175	0.89	-1.3
4,414,102	+				+1.8
4,414,112	+				+2.1
4,414,265	+				+1.7
4,414,328	-				-0.2
4,414,328	-				-0.2
4,414,328	-				-1.3
4,414,328	-				+1.4
4,414,328	-				+1.4
4,414,365	+				-0.3
4,414,411	-				-1.4
4,414,422	+				+0.8
4,414,474	+				-2.2
4,414,488	+				+0.8
4,414,496	-				+1.7
4,414,496	-				-2.1
4,414,532	+				+1.3
4,414,966	+		HP15_4176	0.26	+2.0