Strain Fitness in Marinobacter adhaerens HP15 around HP15_4089

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,320,436	-				+2.0
4,320,626	+				+0.2
4,320,626	+				-1.9
4,320,658	+				-1.8
4,320,705	+		HP15_4088	0.14	-1.6
4,320,801	-		HP15_4088	0.26	+1.4
4,320,833	+		HP15_4088	0.30	-3.0
4,320,833	+		HP15_4088	0.30	-2.9
4,320,841	-		HP15_4088	0.30	+0.2
4,320,929	+		HP15_4088	0.41	-2.0
4,321,002	+		HP15_4088	0.50	-2.4
4,321,005	-		HP15_4088	0.50	-1.6
4,321,131	-		HP15_4088	0.65	-2.5
4,321,142	+		HP15_4088	0.66	-2.9
4,321,415	+				-2.4
4,321,452	+				-1.8
4,321,483	-				-0.2
4,321,546	+				+0.1
4,321,575	+		HP15_4089	0.11	-1.2
4,321,682	-		HP15_4089	0.18	+0.5
4,321,684	+		HP15_4089	0.18	-0.4
4,321,780	-		HP15_4089	0.25	+0.3
4,321,836	+		HP15_4089	0.29	-1.6
4,321,927	+		HP15_4089	0.35	-0.5
4,321,971	+		HP15_4089	0.38	-0.2
4,322,039	-		HP15_4089	0.43	-1.8
4,322,174	-		HP15_4089	0.52	-0.6
4,322,246	+		HP15_4089	0.57	-2.3
4,322,254	-		HP15_4089	0.57	+0.8
4,322,263	+		HP15_4089	0.58	-2.5
4,322,286	+		HP15_4089	0.60	-1.0
4,322,294	+		HP15_4089	0.60	+1.3
4,322,309	+		HP15_4089	0.61	-1.1
4,322,405	+		HP15_4089	0.68	-1.4
4,322,405	+		HP15_4089	0.68	-5.1
4,322,405	+		HP15_4089	0.68	+0.5
4,322,413	-		HP15_4089	0.68	-1.7
4,322,413	-		HP15_4089	0.68	-0.2
4,322,428	+		HP15_4089	0.69	+1.1
4,322,440	+		HP15_4089	0.70	-1.1
4,322,440	+		HP15_4089	0.70	-0.5
4,322,445	+		HP15_4089	0.71	-2.3
4,322,448	-		HP15_4089	0.71	+0.3
4,322,448	-		HP15_4089	0.71	-2.4
4,322,448	-		HP15_4089	0.71	-2.5
4,322,448	-		HP15_4089	0.71	-1.9
4,322,448	-		HP15_4089	0.71	-3.3
4,322,448	-		HP15_4089	0.71	-1.2
4,322,453	-		HP15_4089	0.71	-2.3
4,322,464	+		HP15_4089	0.72	-1.6
4,322,472	-		HP15_4089	0.72	-2.4
4,322,498	+		HP15_4089	0.74	+1.3
4,322,536	-		HP15_4089	0.77	-0.0
4,322,568	+		HP15_4089	0.79	-1.0
4,322,568	+		HP15_4089	0.79	-1.2
4,322,618	-		HP15_4089	0.82	-0.8
4,322,781	-				-1.8
4,322,841	+				+2.0
4,322,851	+				-1.2
4,322,859	-				+0.2
4,322,863	+				-1.6
4,322,955	+		HP15_4090	0.13	-0.8
4,322,963	-		HP15_4090	0.14	-0.2
4,323,034	-		HP15_4090	0.25	-0.9
4,323,103	+		HP15_4090	0.35	+0.8
4,323,155	-		HP15_4090	0.43	-0.5
4,323,225	+		HP15_4090	0.53	-0.6
4,323,233	+		HP15_4090	0.54	-3.0
4,323,233	-		HP15_4090	0.54	+1.4
4,323,233	-		HP15_4090	0.54	-0.4
4,323,233	-		HP15_4090	0.54	-2.1
4,323,313	-		HP15_4090	0.66	-0.0
4,323,344	+		HP15_4090	0.71	-1.5
4,323,352	-		HP15_4090	0.72	-1.9
4,323,362	-		HP15_4090	0.73	-0.3
4,323,362	-		HP15_4090	0.73	-2.0
4,323,400	+		HP15_4090	0.79	-0.2
4,323,431	-		HP15_4090	0.84	+0.2
4,323,451	-		HP15_4090	0.87	-3.3
4,323,485	-				-1.4
4,323,491	-				-0.2
4,323,533	+				-1.3
4,323,616	+				-0.9
4,323,655	+				-1.1
4,323,693	-				+0.3
4,323,754	+				+0.2