Strain Fitness in Marinobacter adhaerens HP15 around HP15_3950

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,179,505	-		HP15_3949	0.19	+0.1
4,179,575	+		HP15_3949	0.24	+0.7
4,179,669	-		HP15_3949	0.32	-0.9
4,179,862	+		HP15_3949	0.48	+1.2
4,179,877	-		HP15_3949	0.49	+2.3
4,179,877	-		HP15_3949	0.49	+1.7
4,179,974	-		HP15_3949	0.57	-1.2
4,180,100	-		HP15_3949	0.67	-0.5
4,180,134	+		HP15_3949	0.70	+0.9
4,180,223	+		HP15_3949	0.77	-0.3
4,180,248	+		HP15_3949	0.79	+2.8
4,180,257	-		HP15_3949	0.80	-0.3
4,180,280	+		HP15_3949	0.82	-1.3
4,180,367	+		HP15_3949	0.89	-0.2
4,180,628	-		HP15_3950	0.17	-0.7
4,180,980	+		HP15_3950	0.66	+0.4
4,180,988	-		HP15_3950	0.67	+0.4
4,181,165	+				+2.6
4,181,188	-				+1.7
4,181,235	-				-1.8
4,181,237	-				+1.9
4,181,247	-				+1.1
4,181,275	-				+1.8
4,181,362	+				-0.9
4,181,389	-				-0.7
4,181,457	+		HP15_3951	0.13	+1.5
4,181,465	-		HP15_3951	0.13	+1.8
4,181,516	+		HP15_3951	0.16	+0.4
4,181,653	-		HP15_3951	0.23	-0.1
4,181,653	-		HP15_3951	0.23	+0.1
4,181,730	+		HP15_3951	0.27	+2.1
4,181,905	+		HP15_3951	0.36	-0.9
4,182,031	+		HP15_3951	0.43	+1.2
4,182,045	-		HP15_3951	0.44	-0.4
4,182,054	-		HP15_3951	0.44	-0.4
4,182,067	-		HP15_3951	0.45	+2.1
4,182,073	-		HP15_3951	0.45	+1.0
4,182,109	+		HP15_3951	0.47	+0.3
4,182,109	+		HP15_3951	0.47	-0.1
4,182,109	+		HP15_3951	0.47	+0.2
4,182,109	+		HP15_3951	0.47	+0.0
4,182,109	+		HP15_3951	0.47	+0.4
4,182,117	-		HP15_3951	0.48	+0.0
4,182,117	-		HP15_3951	0.48	+1.8
4,182,122	+		HP15_3951	0.48	-0.9
4,182,126	+		HP15_3951	0.48	-0.7
4,182,149	+		HP15_3951	0.49	-0.4
4,182,189	-		HP15_3951	0.52	-1.6
4,182,199	+		HP15_3951	0.52	-0.5
4,182,207	-		HP15_3951	0.53	+2.3
4,182,212	-		HP15_3951	0.53	-0.5
4,182,214	+		HP15_3951	0.53	-0.2