Strain Fitness in Marinobacter adhaerens HP15 around HP15_3804

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,028,981	-		HP15_3803	0.30	-0.8
4,028,981	-		HP15_3803	0.30	-0.2
4,029,043	+		HP15_3803	0.35	+1.0
4,029,103	-		HP15_3803	0.40	+1.2
4,029,103	-		HP15_3803	0.40	-1.3
4,029,114	-		HP15_3803	0.41	+1.8
4,029,139	-		HP15_3803	0.43	-0.1
4,029,273	-		HP15_3803	0.54	+0.5
4,029,301	+		HP15_3803	0.56	+0.8
4,029,302	-		HP15_3803	0.56	+1.9
4,029,302	-		HP15_3803	0.56	-0.3
4,029,333	+		HP15_3803	0.59	+0.8
4,029,353	-		HP15_3803	0.60	+2.1
4,029,394	-		HP15_3803	0.64	+0.0
4,029,430	+		HP15_3803	0.67	-1.9
4,029,494	+		HP15_3803	0.72	+0.9
4,029,524	-		HP15_3803	0.74	+2.1
4,029,603	-		HP15_3803	0.81	-0.1
4,029,689	-		HP15_3803	0.88	+0.7
4,029,779	+				+0.3
4,029,834	-				+1.7
4,029,853	-				-0.6
4,029,858	+				-1.3
4,029,876	-				+1.0
4,029,883	+				+1.7
4,029,911	-				-1.0
4,029,921	-				+1.1
4,030,158	+		HP15_3804	0.15	+2.2
4,030,173	-		HP15_3804	0.16	+0.7
4,030,182	-		HP15_3804	0.17	-0.3
4,030,337	+		HP15_3804	0.29	-0.9
4,030,497	+		HP15_3804	0.41	-2.0
4,030,505	-		HP15_3804	0.42	+2.4
4,030,537	-		HP15_3804	0.45	+1.6
4,030,590	+		HP15_3804	0.49	-1.4
4,030,673	+		HP15_3804	0.55	-1.1
4,030,717	-		HP15_3804	0.59	+1.4
4,030,744	+		HP15_3804	0.61	-1.9
4,030,950	-		HP15_3804	0.77	-0.0
4,031,019	-		HP15_3804	0.82	-1.4
4,031,059	-		HP15_3804	0.85	-0.2
4,031,091	+		HP15_3804	0.88	-1.1
4,031,091	+		HP15_3804	0.88	-0.3
4,031,116	+		HP15_3804	0.90	-0.1
4,031,175	+				+0.3
4,031,259	+				-1.0
4,031,267	-				+0.6
4,031,268	+				+1.4
4,031,276	-				+0.4
4,031,286	+				-0.2
4,031,291	+				-1.2
4,031,303	+		HP15_3805	0.12	-0.5
4,031,303	+		HP15_3805	0.12	-0.0
4,031,352	-		HP15_3805	0.26	-1.2
4,031,352	-		HP15_3805	0.26	+1.5
4,031,379	+		HP15_3805	0.34	+1.7
4,031,382	-		HP15_3805	0.35	-1.1
4,031,393	-		HP15_3805	0.38	+1.9
4,031,467	+		HP15_3805	0.60	-0.5
4,031,467	+		HP15_3805	0.60	+0.7
4,031,512	+		HP15_3805	0.73	-0.2
4,031,654	-				-0.8
4,031,678	-				-1.2
4,032,022	+		HP15_3806	0.87	+1.4
4,032,022	+		HP15_3806	0.87	+0.2
4,032,088	-				-1.7