Strain Fitness in Marinobacter adhaerens HP15 around HP15_3782

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,000,790	-		HP15_3780	0.84	-0.3
4,000,796	-		HP15_3780	0.85	+2.1
4,000,815	+		HP15_3780	0.87	+0.8
4,000,833	-		HP15_3780	0.89	-1.0
4,000,860	+				+1.7
4,000,947	-				-1.9
4,001,112	-				-0.4
4,001,122	-				-0.9
4,001,122	-				-0.3
4,001,144	-				-0.9
4,001,193	-		HP15_3781	0.17	-2.2
4,001,261	+		HP15_3781	0.27	-3.1
4,001,305	+		HP15_3781	0.33	+0.1
4,001,305	+		HP15_3781	0.33	-0.7
4,001,313	-		HP15_3781	0.34	-4.2
4,001,370	+		HP15_3781	0.43	-3.9
4,001,438	+		HP15_3781	0.53	+0.1
4,001,438	+				-0.4
4,001,498	-		HP15_3781	0.62	-3.0
4,001,526	+		HP15_3781	0.66	-3.2
4,001,526	+		HP15_3781	0.66	-2.4
4,001,534	-		HP15_3781	0.67	-0.5
4,001,534	-		HP15_3781	0.67	-1.9
4,001,534	-		HP15_3781	0.67	-1.1
4,001,747	+				-1.4
4,001,747	+				-1.6
4,001,815	+				-0.2
4,002,093	+		HP15_3782	0.13	-1.4
4,002,120	-		HP15_3782	0.14	-0.6
4,002,125	-		HP15_3782	0.14	+1.2
4,002,142	-		HP15_3782	0.15	+0.1
4,002,237	-		HP15_3782	0.19	-0.9
4,002,246	+		HP15_3782	0.19	-1.3
4,002,252	-		HP15_3782	0.19	-0.4
4,002,252	-		HP15_3782	0.19	+0.1
4,002,377	-		HP15_3782	0.24	+2.1
4,002,407	+		HP15_3782	0.25	+2.3
4,002,447	+		HP15_3782	0.27	-2.9
4,002,460	+		HP15_3782	0.28	+1.1
4,002,468	-		HP15_3782	0.28	+0.4
4,002,470	+		HP15_3782	0.28	+0.3
4,002,470	+		HP15_3782	0.28	-0.9
4,002,473	-		HP15_3782	0.28	-1.6
4,002,478	-		HP15_3782	0.28	-0.3
4,002,524	-		HP15_3782	0.30	+0.8
4,002,529	-		HP15_3782	0.30	+0.6
4,002,562	+		HP15_3782	0.32	-0.4
4,002,577	+		HP15_3782	0.32	+0.3
4,002,595	+		HP15_3782	0.33	+2.0
4,002,611	+		HP15_3782	0.34	-1.6
4,002,619	-		HP15_3782	0.34	-0.1
4,002,621	+		HP15_3782	0.34	+1.1
4,002,730	+		HP15_3782	0.38	+0.0
4,002,737	-		HP15_3782	0.39	-0.0
4,002,767	+		HP15_3782	0.40	-0.4
4,002,956	+		HP15_3782	0.48	-0.9
4,002,964	-		HP15_3782	0.48	-1.5
4,002,964	-		HP15_3782	0.48	+0.1
4,002,971	+		HP15_3782	0.48	-1.4
4,003,018	+		HP15_3782	0.50	-1.7
4,003,027	-		HP15_3782	0.50	-0.8
4,003,037	+		HP15_3782	0.51	-2.6
4,003,117	+		HP15_3782	0.54	-0.6
4,003,214	-		HP15_3782	0.58	+2.1
4,003,214	-		HP15_3782	0.58	-0.2
4,003,305	+		HP15_3782	0.62	-2.6
4,003,313	-		HP15_3782	0.62	-1.4
4,003,313	-		HP15_3782	0.62	-2.7
4,003,332	-		HP15_3782	0.63	-0.7
4,003,352	+		HP15_3782	0.64	-1.0
4,003,359	+		HP15_3782	0.64	+2.1
4,003,418	+		HP15_3782	0.66	-1.3
4,003,494	+		HP15_3782	0.69	+1.2
4,003,517	+		HP15_3782	0.70	-0.4
4,003,651	+		HP15_3782	0.76	-2.5
4,003,656	+		HP15_3782	0.76	-0.3
4,003,659	-		HP15_3782	0.76	+1.2
4,003,669	-		HP15_3782	0.76	+0.4
4,003,794	+		HP15_3782	0.81	-0.6
4,003,794	+		HP15_3782	0.81	+1.8
4,003,799	+		HP15_3782	0.82	+0.6
4,003,844	+		HP15_3782	0.83	-0.6
4,003,852	-		HP15_3782	0.84	-1.0
4,003,876	+		HP15_3782	0.85	+1.3
4,003,936	+		HP15_3782	0.87	+1.5
4,003,944	-		HP15_3782	0.87	-0.7
4,003,944	-		HP15_3782	0.87	+0.9
4,003,944	-		HP15_3782	0.87	+0.5
4,003,975	-		HP15_3782	0.89	+4.0
4,004,114	+				+0.0
4,004,122	-				+1.3
4,004,137	-				-1.6
4,004,142	+				-2.3
4,004,147	+				+0.6
4,004,147	+				+2.0
4,004,155	-				+1.0
4,004,155	-				+0.1
4,004,163	+				-0.6
4,004,203	-				+0.5
4,004,219	+				-1.3
4,004,229	-				-1.2
4,004,331	+				-1.3
4,004,339	-				+0.8
4,004,450	+				-0.4
4,004,516	+				+1.9
4,004,540	-				-0.4
4,004,607	-				+0.1
4,004,630	+				+2.0
4,004,630	+				+1.6
4,004,638	-				-0.4
4,004,643	-				-1.0
4,004,654	+				-0.2
4,004,655	+				+0.3
4,004,790	+				+1.2
4,004,827	-				-1.7
4,004,858	-				-0.5
4,004,858	-				-0.0
4,004,976	-				-1.8
4,004,981	-				-0.0
4,005,011	-				-1.3
4,005,097	-				+1.6
4,005,112	+				+0.4
4,005,181	+				+0.2
4,005,181	+				+0.4
4,005,181	+				+0.5
4,005,189	-				+1.9
4,005,189	-				+2.4
4,005,208	-				+0.7
4,005,208	-				+0.3
4,005,255	+				-0.7