Strain Fitness in Marinobacter adhaerens HP15 around HP15_3570

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,760,872	-		HP15_3569	0.32	+0.2
3,760,873	-		HP15_3569	0.32	-0.7
3,760,909	+		HP15_3569	0.35	+1.8
3,760,922	-		HP15_3569	0.36	+2.1
3,760,947	+		HP15_3569	0.37	+1.4
3,760,947	+		HP15_3569	0.37	-1.2
3,760,955	-		HP15_3569	0.38	+1.7
3,760,991	+		HP15_3569	0.41	+1.9
3,760,999	-		HP15_3569	0.41	-1.4
3,761,005	-		HP15_3569	0.42	+1.5
3,761,041	+		HP15_3569	0.44	+1.0
3,761,093	-		HP15_3569	0.48	+2.2
3,761,330	+		HP15_3569	0.65	-0.6
3,761,365	-		HP15_3569	0.67	-1.6
3,761,487	-		HP15_3569	0.76	+1.8
3,761,502	-		HP15_3569	0.77	+1.4
3,761,511	-		HP15_3569	0.78	+1.5
3,761,593	+		HP15_3569	0.84	-0.3
3,761,688	+				+0.7
3,761,744	+				-0.3
3,761,849	-				-1.8
3,761,854	-				+1.1
3,761,854	-				+0.9
3,761,856	+				+1.9
3,761,906	+				-1.5
3,761,906	+				+1.5
3,762,003	+		HP15_3570	0.15	+0.3
3,762,021	-		HP15_3570	0.16	-0.3
3,762,131	+		HP15_3570	0.28	-1.9
3,762,139	-		HP15_3570	0.29	+0.3
3,762,178	+		HP15_3570	0.33	-0.5
3,762,183	+		HP15_3570	0.33	-0.0
3,762,191	-		HP15_3570	0.34	-0.8
3,762,191	-		HP15_3570	0.34	-0.4
3,762,335	-		HP15_3570	0.49	-0.1
3,762,378	+		HP15_3570	0.53	-0.5
3,762,378	+		HP15_3570	0.53	-1.4
3,762,590	-		HP15_3570	0.75	+1.6
3,762,627	-		HP15_3570	0.79	+2.0
3,762,629	+		HP15_3570	0.79	+0.5
3,762,661	-		HP15_3570	0.82	+0.7
3,762,777	+				+0.5
3,762,934	+		HP15_3571	0.20	+0.1
3,762,939	+		HP15_3571	0.21	+2.0
3,762,954	+		HP15_3571	0.24	+2.0
3,762,962	-		HP15_3571	0.25	+0.8
3,763,145	-		HP15_3571	0.59	-0.4
3,763,148	+		HP15_3571	0.60	-1.8
3,763,158	+		HP15_3571	0.61	+0.8
3,763,186	+		HP15_3571	0.66	-1.4
3,763,261	+		HP15_3571	0.80	+1.7
3,763,274	-		HP15_3571	0.83	+0.6
3,763,289	+		HP15_3571	0.85	+2.5
3,763,352	-				-0.1
3,763,352	-				-1.1
3,763,354	+				+0.0
3,763,391	-				+1.3
3,763,391	-				+1.7
3,763,472	-				+0.0
3,763,474	+				+0.6
3,763,542	+		HP15_3572	0.15	+0.7
3,763,580	-		HP15_3572	0.18	-0.2
3,763,733	+		HP15_3572	0.31	-0.3
3,763,741	-		HP15_3572	0.31	+0.2
3,763,808	+		HP15_3572	0.37	+1.4
3,763,817	+		HP15_3572	0.38	-1.2