Strain Fitness in Marinobacter adhaerens HP15 around HP15_3561

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,750,407	+		HP15_3560	0.32	+1.3
3,750,422	+		HP15_3560	0.34	+2.1
3,750,453	+		HP15_3560	0.36	-1.2
3,750,521	-		HP15_3560	0.42	+1.4
3,750,543	+		HP15_3560	0.44	+2.0
3,750,543	+		HP15_3560	0.44	+1.4
3,750,543	+		HP15_3560	0.44	+2.0
3,750,543	+		HP15_3560	0.44	-2.6
3,750,703	+		HP15_3560	0.58	+0.4
3,750,711	-		HP15_3560	0.59	+1.5
3,750,899	+		HP15_3560	0.75	-0.3
3,750,902	-		HP15_3560	0.75	+1.3
3,750,930	+		HP15_3560	0.78	+2.1
3,750,976	-		HP15_3560	0.82	+1.6
3,751,062	-		HP15_3560	0.89	+0.9
3,751,072	+				+0.8
3,751,072	+				+0.6
3,751,108	-				-1.1
3,751,143	-				-2.2
3,751,148	-				+2.1
3,751,180	+				-1.0
3,751,186	+				+0.3
3,751,201	-				+1.7
3,751,272	+				-0.0
3,751,305	+				+0.2
3,751,332	+				+0.5
3,751,340	-				-0.7
3,751,340	-				+1.7
3,751,348	+				-0.8
3,751,348	+				+1.1
3,751,369	-				+0.0
3,751,447	-		HP15_3561	0.17	-0.4
3,751,569	+		HP15_3561	0.35	+2.7
3,751,569	+		HP15_3561	0.35	+1.9
3,751,596	+		HP15_3561	0.39	-1.2
3,751,596	+		HP15_3561	0.39	+0.9
3,751,604	-		HP15_3561	0.40	+1.3
3,751,741	-		HP15_3561	0.61	+2.0
3,751,756	-		HP15_3561	0.63	+2.1
3,751,785	-		HP15_3561	0.67	+1.3
3,751,813	-		HP15_3561	0.71	+1.1
3,751,858	-		HP15_3561	0.78	+2.1
3,751,909	+		HP15_3561	0.86	-1.0
3,751,954	-				-0.6
3,752,011	-				+1.2
3,752,011	-				+1.4
3,752,032	+				-0.2
3,752,037	+				+0.4
3,752,051	+				+2.0
3,752,162	+				+0.1
3,752,171	+				-1.0
3,752,185	-				-1.8
3,752,210	+				+1.9
3,752,218	+				-0.1
3,752,218	+				+0.3
3,752,226	-				+0.6
3,752,288	-		HP15_3562	0.12	+0.3
3,752,320	+		HP15_3562	0.15	+1.8
3,752,366	+		HP15_3562	0.19	-0.3
3,752,370	-		HP15_3562	0.19	-1.2
3,752,472	+		HP15_3562	0.27	+1.0
3,752,682	-		HP15_3562	0.44	-0.2
3,752,746	-		HP15_3562	0.50	-0.6
3,752,746	-		HP15_3562	0.50	-0.2