Strain Fitness in Marinobacter adhaerens HP15 around HP15_3540

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,726,067	+		HP15_3538	0.86	+0.5
3,726,136	+				-0.7
3,726,136	+				-2.3
3,726,138	+				+0.2
3,726,212	+				-0.7
3,726,215	-				+1.6
3,726,220	-				+1.7
3,726,253	-				-0.6
3,726,358	-				+1.5
3,726,361	-				+1.8
3,726,378	-				-0.5
3,726,413	-				+0.3
3,726,454	+		HP15_3539	0.16	-0.8
3,726,562	-		HP15_3539	0.36	-0.0
3,726,562	-		HP15_3539	0.36	+0.4
3,726,586	+		HP15_3539	0.40	-0.6
3,726,654	+		HP15_3539	0.52	-0.6
3,726,662	-		HP15_3539	0.53	-0.8
3,726,702	+		HP15_3539	0.61	-0.3
3,726,718	-		HP15_3539	0.63	-2.3
3,726,733	-		HP15_3539	0.66	+0.2
3,726,795	+		HP15_3539	0.77	+2.8
3,726,803	-		HP15_3539	0.79	-0.8
3,727,048	-				-0.0
3,727,119	+				-0.8
3,727,122	-				-0.4
3,727,367	-		HP15_3540	0.33	-0.2
3,727,415	+		HP15_3540	0.38	-2.3
3,727,423	-		HP15_3540	0.39	+0.5
3,727,458	+		HP15_3540	0.43	-1.5
3,727,459	+		HP15_3540	0.43	-1.6
3,727,464	+		HP15_3540	0.43	-0.8
3,727,469	+		HP15_3540	0.44	-0.8
3,727,494	-		HP15_3540	0.47	-0.4
3,727,539	-		HP15_3540	0.52	-2.1
3,727,548	-		HP15_3540	0.52	+0.3
3,727,557	+		HP15_3540	0.53	+2.0
3,727,565	-		HP15_3540	0.54	+1.8
3,727,690	+		HP15_3540	0.68	+0.1
3,727,803	-		HP15_3540	0.80	+0.2
3,727,803	-		HP15_3540	0.80	+2.5
3,727,907	+				+1.1
3,727,907	+				+0.8
3,727,907	+				-0.1
3,727,907	+				-3.0
3,727,921	-				-2.9
3,727,947	+				-0.3
3,727,996	+				-0.9
3,728,000	+				+0.0
3,728,055	+				+1.7
3,728,192	-				+0.2
3,728,338	+				-0.0
3,728,363	+				-0.7
3,728,363	+				-0.8
3,728,363	+				+0.1
3,728,364	-				-0.9
3,728,364	-				-1.2
3,728,364	-				+1.2
3,728,365	-				+0.2
3,728,422	+				-0.5
3,728,502	+				+1.5
3,728,579	-		HP15_3541	0.16	-1.0
3,728,626	+		HP15_3541	0.20	-0.7
3,728,838	+		HP15_3541	0.38	-1.5
3,728,870	-		HP15_3541	0.41	-0.5
3,728,894	-		HP15_3541	0.43	-3.5
3,728,894	-		HP15_3541	0.43	+1.2
3,728,894	-		HP15_3541	0.43	-0.3
3,728,894	-		HP15_3541	0.43	+0.3