Strain Fitness in Marinobacter adhaerens HP15 around HP15_3439

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,616,697	-		HP15_3438	0.54	+0.2
3,616,718	-		HP15_3438	0.55	-0.5
3,616,744	+		HP15_3438	0.56	+1.4
3,616,752	-		HP15_3438	0.57	+0.3
3,616,815	+		HP15_3438	0.60	-2.3
3,616,824	+		HP15_3438	0.61	+2.4
3,616,847	+		HP15_3438	0.62	+1.4
3,616,906	+		HP15_3438	0.65	+1.9
3,616,965	-		HP15_3438	0.68	+0.2
3,616,981	-		HP15_3438	0.69	+0.6
3,616,986	-		HP15_3438	0.70	+1.4
3,617,009	-		HP15_3438	0.71	-0.4
3,617,052	+		HP15_3438	0.73	+1.5
3,617,060	-		HP15_3438	0.74	-2.0
3,617,128	-		HP15_3438	0.77	+2.6
3,617,269	+		HP15_3438	0.85	+0.3
3,617,331	+		HP15_3438	0.88	-0.6
3,617,403	-				+3.0
3,617,421	+				+0.9
3,617,444	-				+0.0
3,617,444	-				-0.6
3,617,480	+				-1.0
3,617,488	-				+1.7
3,617,495	-				+0.0
3,617,584	+				-0.3
3,617,610	-				+0.2
3,617,683	-				-1.2
3,617,828	+				+0.2
3,617,930	+		HP15_3439	0.17	-1.5
3,618,006	+		HP15_3439	0.22	-0.5
3,618,017	+		HP15_3439	0.23	+2.4
3,618,025	-		HP15_3439	0.23	+0.9
3,618,025	-		HP15_3439	0.23	-1.5
3,618,040	+		HP15_3439	0.24	+0.4
3,618,122	+		HP15_3439	0.30	-1.8
3,618,170	+		HP15_3439	0.33	+0.7
3,618,364	+		HP15_3439	0.47	-0.7
3,618,364	+		HP15_3439	0.47	-2.3
3,618,364	+		HP15_3439	0.47	-0.4
3,618,364	+		HP15_3439	0.47	+1.3
3,618,372	-		HP15_3439	0.47	-2.3
3,618,372	-		HP15_3439	0.47	-1.0
3,618,372	-		HP15_3439	0.47	-0.8
3,618,372	-		HP15_3439	0.47	-0.5
3,618,372	-		HP15_3439	0.47	-1.9
3,618,372	-		HP15_3439	0.47	+0.3
3,618,372	-		HP15_3439	0.47	+1.2
3,618,372	-		HP15_3439	0.47	-0.9
3,618,613	+		HP15_3439	0.64	-0.0
3,618,707	+		HP15_3439	0.70	+0.2
3,618,715	-		HP15_3439	0.71	-0.2
3,618,829	+		HP15_3439	0.79	+1.4
3,618,965	+		HP15_3439	0.88	+0.2
3,618,973	-		HP15_3439	0.88	-0.2
3,619,070	-				+2.0
3,619,117	-				-0.2
3,619,145	+				-0.7
3,619,161	+				-0.4
3,619,209	+				+1.3
3,619,239	+				+1.1
3,619,239	+				-0.6
3,619,239	+				-0.3
3,619,247	-				-1.1
3,619,247	-				-0.7
3,619,249	+				-2.5
3,619,249	+				+1.3
3,619,257	-				-0.5
3,619,361	-				+2.0
3,619,423	+		HP15_3440	0.11	-0.8
3,619,431	-		HP15_3440	0.12	+0.8
3,619,471	+		HP15_3440	0.14	-0.2
3,619,530	-		HP15_3440	0.18	+1.1
3,619,537	+		HP15_3440	0.19	+1.5
3,619,566	-		HP15_3440	0.21	-0.2
3,619,710	+		HP15_3440	0.31	-0.2
3,619,731	+		HP15_3440	0.32	+0.8
3,619,765	-		HP15_3440	0.35	+1.4
3,619,919	+		HP15_3440	0.45	+0.2
3,620,056	-		HP15_3440	0.55	+1.3
3,620,056	-		HP15_3440	0.55	-1.1
3,620,104	-		HP15_3440	0.58	+2.0
3,620,104	-		HP15_3440	0.58	+1.5