Strain Fitness in Marinobacter adhaerens HP15 around HP15_3405

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,577,084	-		HP15_3404	0.49	-2.2
3,577,141	+		HP15_3404	0.53	+0.5
3,577,200	+		HP15_3404	0.57	+1.5
3,577,299	+		HP15_3404	0.64	+2.0
3,577,399	+		HP15_3404	0.70	-1.2
3,577,399	+		HP15_3404	0.70	+0.7
3,577,457	+		HP15_3404	0.74	+2.0
3,577,519	-		HP15_3404	0.79	-1.7
3,577,534	+		HP15_3404	0.80	-4.3
3,577,537	-		HP15_3404	0.80	+1.1
3,577,559	-		HP15_3404	0.81	+0.3
3,577,562	+		HP15_3404	0.82	+0.6
3,577,597	-		HP15_3404	0.84	-1.5
3,577,597	-		HP15_3404	0.84	-0.2
3,577,639	+		HP15_3404	0.87	-2.6
3,577,647	-		HP15_3404	0.88	-0.6
3,577,708	-				-0.4
3,577,708	-				-0.3
3,577,870	+				-0.4
3,577,948	-				+1.1
3,577,960	-				-0.8
3,577,968	+				-2.7
3,578,153	-				-0.1
3,578,160	+				+0.3
3,578,201	-		HP15_3405	0.13	-0.5
3,578,389	-		HP15_3405	0.33	-0.8
3,578,399	-		HP15_3405	0.34	-0.1
3,578,423	+		HP15_3405	0.36	+0.6
3,578,454	-		HP15_3405	0.40	+1.3
3,578,638	+		HP15_3405	0.59	+2.1
3,578,646	-		HP15_3405	0.60	-0.1
3,578,646	-		HP15_3405	0.60	-0.3
3,578,793	+		HP15_3405	0.75	-1.2
3,578,812	+		HP15_3405	0.77	-1.0
3,578,820	-		HP15_3405	0.78	-0.5
3,578,843	+		HP15_3405	0.81	-0.6
3,578,872	+		HP15_3405	0.84	-1.3
3,578,905	-		HP15_3405	0.87	+2.1
3,578,936	-				+0.1
3,579,073	+				-2.4
3,579,078	+				-0.6
3,579,081	-				-0.8
3,579,237	-		HP15_3407	0.15	-1.1
3,579,559	-		HP15_3407	0.38	+0.6
3,579,598	-		HP15_3407	0.41	+0.6
3,579,598	-		HP15_3407	0.41	-2.4
3,579,611	-		HP15_3407	0.42	-0.0
3,579,760	+		HP15_3407	0.53	-1.6
3,579,972	-		HP15_3407	0.68	-0.0