Strain Fitness in Marinobacter adhaerens HP15 around HP15_3329

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,487,897	-				-0.2
3,487,906	-				+2.0
3,488,125	-		HP15_3328	0.32	-2.4
3,488,134	+		HP15_3328	0.33	+1.4
3,488,166	+		HP15_3328	0.37	-0.8
3,488,308	-		HP15_3328	0.56	+0.2
3,488,341	-		HP15_3328	0.61	-0.5
3,488,391	+		HP15_3328	0.67	+1.4
3,488,519	-		HP15_3328	0.84	-1.8
3,488,578	+				-1.6
3,488,978	-		HP15_3329	0.10	-0.2
3,489,114	+		HP15_3329	0.20	-0.3
3,489,138	+		HP15_3329	0.21	+0.6
3,489,148	+		HP15_3329	0.22	-0.1
3,489,156	-		HP15_3329	0.23	-0.8
3,489,181	+		HP15_3329	0.24	+0.1
3,489,181	+		HP15_3329	0.24	+1.9
3,489,189	-		HP15_3329	0.25	+0.0
3,489,196	-		HP15_3329	0.25	-0.6
3,489,307	+		HP15_3329	0.33	-1.7
3,489,309	+		HP15_3329	0.33	-0.8
3,489,309	+		HP15_3329	0.33	+1.9
3,489,310	-		HP15_3329	0.33	+0.4
3,489,317	-		HP15_3329	0.34	-0.2
3,489,317	-		HP15_3329	0.34	-0.8
3,489,405	-		HP15_3329	0.40	+0.2
3,489,495	+		HP15_3329	0.46	-0.1
3,489,495	+		HP15_3329	0.46	+2.0
3,489,503	-		HP15_3329	0.47	+2.4
3,489,516	-		HP15_3329	0.48	-1.5
3,489,529	-		HP15_3329	0.48	-1.2
3,489,593	+		HP15_3329	0.53	-1.9
3,489,615	+		HP15_3329	0.54	-1.0
3,489,727	-		HP15_3329	0.62	+1.4
3,489,799	+		HP15_3329	0.67	-3.0
3,489,799	+		HP15_3329	0.67	+0.5
3,489,799	+		HP15_3329	0.67	-1.1
3,489,976	+		HP15_3329	0.79	-2.7
3,490,018	+		HP15_3329	0.82	+1.4
3,490,042	+		HP15_3329	0.84	-0.9
3,490,042	+		HP15_3329	0.84	+0.4
3,490,044	-		HP15_3329	0.84	+3.3
3,490,050	-		HP15_3329	0.85	-1.9
3,490,050	-		HP15_3329	0.85	-0.0
3,490,050	-		HP15_3329	0.85	+1.2
3,490,065	-		HP15_3329	0.86	-0.6
3,490,158	-				+1.4
3,490,233	-				+2.4
3,490,320	+				-1.1
3,490,365	-				+0.5
3,490,438	+				-2.3
3,490,586	+		HP15_3330	0.22	+0.6
3,490,627	+		HP15_3330	0.29	-0.4
3,490,670	+		HP15_3330	0.36	-0.1
3,490,678	-		HP15_3330	0.37	-0.2
3,490,826	+		HP15_3330	0.60	-0.1
3,490,855	-		HP15_3330	0.64	+0.2
3,490,857	+		HP15_3330	0.65	+1.8
3,490,870	-		HP15_3330	0.67	-0.3
3,490,941	+		HP15_3330	0.78	+0.3
3,490,965	-		HP15_3330	0.82	-0.6
3,491,027	+				-0.3
3,491,035	-				-0.6
3,491,035	-				-1.0
3,491,035	-				+0.7
3,491,248	-				-0.1