Strain Fitness in Marinobacter adhaerens HP15 around HP15_3322
Experiment: monoculture; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 6 |
---|---|---|---|---|---|
remove | |||||
3,483,331 | - | HP15_3321 | 0.10 | +1.8 | |
3,483,406 | + | HP15_3321 | 0.21 | +0.2 | |
3,483,463 | + | HP15_3321 | 0.30 | -1.6 | |
3,483,479 | + | HP15_3321 | 0.32 | -2.9 | |
3,483,480 | - | HP15_3321 | 0.32 | +1.4 | |
3,483,674 | - | HP15_3321 | 0.61 | +1.2 | |
3,483,688 | + | HP15_3321 | 0.63 | -0.0 | |
3,483,787 | + | HP15_3321 | 0.78 | +0.2 | |
3,483,931 | + | +1.6 | |||
3,484,640 | - | -0.2 | |||
3,484,685 | - | +0.6 | |||
3,484,731 | - | HP15_3324 | 0.11 | +0.2 | |
3,484,800 | + | HP15_3324 | 0.19 | +2.1 | |
3,484,920 | - | HP15_3324 | 0.33 | +0.3 | |
3,485,070 | - | HP15_3324 | 0.51 | +1.0 | |
3,485,206 | - | HP15_3324 | 0.66 | +1.2 | |
3,485,389 | - | HP15_3324 | 0.88 | +0.2 |
Or see this region's nucleotide sequence