Strain Fitness in Marinobacter adhaerens HP15 around HP15_3187

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,341,505	+		HP15_3186	0.35	-0.4
3,341,531	+		HP15_3186	0.37	-1.2
3,341,544	-		HP15_3186	0.38	-2.2
3,341,552	-		HP15_3186	0.39	-1.8
3,341,559	-		HP15_3186	0.40	-1.1
3,341,708	+		HP15_3186	0.52	+1.3
3,341,712	-		HP15_3186	0.53	-1.1
3,341,854	+		HP15_3186	0.65	+1.6
3,341,862	+		HP15_3186	0.66	-0.9
3,341,867	+		HP15_3186	0.66	+2.3
3,341,875	-		HP15_3186	0.67	+2.0
3,341,958	-		HP15_3186	0.74	+1.3
3,341,961	+		HP15_3186	0.74	+1.2
3,341,969	-		HP15_3186	0.75	-1.2
3,342,006	-		HP15_3186	0.78	-0.4
3,342,113	+		HP15_3186	0.88	-1.7
3,342,250	-				+2.1
3,342,599	-		HP15_3187	0.15	-1.2
3,342,615	+		HP15_3187	0.16	-0.7
3,342,620	+		HP15_3187	0.16	+2.1
3,342,639	+		HP15_3187	0.17	-0.3
3,342,710	-		HP15_3187	0.23	+0.4
3,342,710	-		HP15_3187	0.23	-0.6
3,342,847	+		HP15_3187	0.32	+1.9
3,342,855	-		HP15_3187	0.33	-1.2
3,343,037	+		HP15_3187	0.46	+2.1
3,343,045	-		HP15_3187	0.46	-0.6
3,343,060	+		HP15_3187	0.47	+1.7
3,343,070	-		HP15_3187	0.48	-0.1
3,343,116	-		HP15_3187	0.51	+2.0
3,343,144	-		HP15_3187	0.53	+0.2
3,343,146	+		HP15_3187	0.54	+0.6
3,343,154	-		HP15_3187	0.54	+1.6
3,343,154	-		HP15_3187	0.54	-0.5
3,343,154	-		HP15_3187	0.54	-0.5
3,343,154	-		HP15_3187	0.54	+0.5
3,343,267	+		HP15_3187	0.62	-0.1
3,343,275	-		HP15_3187	0.63	-1.4
3,343,388	+		HP15_3187	0.71	+1.9
3,343,388	+		HP15_3187	0.71	+1.4
3,343,396	-		HP15_3187	0.71	+1.3
3,343,542	+		HP15_3187	0.82	+2.1
3,343,553	+		HP15_3187	0.82	-0.3
3,343,670	+				+0.3
3,343,706	+				+1.2
3,343,720	+				+1.1
3,343,740	+				-0.4
3,343,862	-				+1.3
3,343,891	+				+0.0
3,343,899	-				+2.6
3,343,969	+				+1.0
3,343,977	-				+1.7
3,343,977	-				+1.3
3,344,001	-				-0.4
3,344,124	+				+0.8
3,344,453	+		HP15_3188	0.32	-0.8
3,344,485	+		HP15_3188	0.35	+1.9
3,344,525	-		HP15_3188	0.40	+0.3
3,344,525	-		HP15_3188	0.40	+1.9
3,344,633	+		HP15_3188	0.51	-1.6
3,344,633	-		HP15_3188	0.51	-0.9
3,344,645	+		HP15_3188	0.52	+0.3
3,344,653	-		HP15_3188	0.53	-0.4
3,344,665	-		HP15_3188	0.55	+1.9
3,344,676	-		HP15_3188	0.56	-0.7
3,344,696	+		HP15_3188	0.58	+0.0
3,344,704	-		HP15_3188	0.59	+1.7
3,344,722	-		HP15_3188	0.61	+1.6
3,344,798	+		HP15_3188	0.69	-0.0