Strain Fitness in Marinobacter adhaerens HP15 around HP15_3148

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,297,841	+		HP15_3144	0.75	+0.7
3,297,841	+		HP15_3144	0.75	-0.4
3,297,841	+		HP15_3144	0.75	-1.1
3,297,943	+		HP15_3144	0.81	+0.9
3,297,951	-		HP15_3144	0.81	+0.8
3,297,998	+		HP15_3144	0.84	+1.3
3,298,054	-		HP15_3144	0.88	-2.2
3,298,168	+				-1.6
3,298,178	+				+1.3
3,298,187	-				-1.6
3,298,231	-				-2.4
3,298,231	-				-0.1
3,298,538	-				-0.2
3,298,616	+				+0.9
3,298,673	-		HP15_3148	0.16	+1.3
3,298,727	+		HP15_3148	0.56	-0.5
3,298,764	+		HP15_3148	0.83	-0.5
3,298,777	+				-0.9
3,298,790	-				+1.8
3,298,837	+				+2.8
3,298,900	-		HP15_3146	0.18	-0.5
3,298,917	-		HP15_3146	0.20	+0.4
3,298,919	-		HP15_3146	0.20	-0.4
3,298,940	+		HP15_3146	0.24	+2.3
3,298,997	+		HP15_3146	0.33	-0.7
3,299,086	-		HP15_3146	0.46	+0.3
3,299,108	-		HP15_3146	0.50	+0.6
3,299,132	-		HP15_3146	0.53	-2.2
3,299,142	+		HP15_3146	0.55	+0.3
3,299,149	-		HP15_3146	0.56	-1.4
3,299,161	+		HP15_3146	0.58	+1.1
3,299,184	+		HP15_3146	0.62	-0.7
3,299,209	-		HP15_3146	0.65	+0.1
3,299,258	+		HP15_3146	0.73	-1.7
3,299,258	+		HP15_3146	0.73	-0.6
3,299,268	-		HP15_3146	0.75	+2.5
3,299,276	+		HP15_3146	0.76	-1.1
3,299,408	+				+1.6
3,299,421	-				-1.3
3,299,541	+		HP15_3147	0.15	-0.1
3,299,593	-		HP15_3147	0.23	+0.6
3,299,647	+		HP15_3147	0.32	-0.3
3,299,670	+		HP15_3147	0.35	-1.4
3,299,678	-		HP15_3147	0.37	-1.2
3,299,678	-		HP15_3147	0.37	-0.5
3,299,678	-		HP15_3147	0.37	-0.7
3,299,713	-		HP15_3147	0.42	-0.4
3,299,730	-		HP15_3147	0.45	-1.8
3,299,762	+		HP15_3147	0.50	-1.3
3,299,762	+		HP15_3147	0.50	+0.2