Strain Fitness in Marinobacter adhaerens HP15 around HP15_3130

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,281,551	+		HP15_3129	0.31	+1.1
3,281,554	-		HP15_3129	0.31	+0.3
3,281,564	-		HP15_3129	0.32	-0.5
3,281,571	-		HP15_3129	0.32	+0.1
3,281,620	-		HP15_3129	0.37	+2.6
3,281,627	-		HP15_3129	0.37	-0.3
3,281,627	-		HP15_3129	0.37	+1.3
3,281,682	-		HP15_3129	0.42	-0.5
3,281,719	-		HP15_3129	0.45	-1.6
3,281,794	-		HP15_3129	0.51	+0.9
3,281,836	+		HP15_3129	0.55	+0.4
3,281,892	+		HP15_3129	0.60	-0.4
3,281,949	+		HP15_3129	0.64	+0.9
3,282,057	+		HP15_3129	0.74	+2.2
3,282,057	+		HP15_3129	0.74	-0.1
3,282,065	-		HP15_3129	0.74	-0.4
3,282,123	+		HP15_3129	0.79	+0.7
3,282,136	+		HP15_3129	0.80	+1.7
3,282,141	+		HP15_3129	0.81	+1.6
3,282,152	+		HP15_3129	0.82	+0.7
3,282,185	+		HP15_3129	0.84	+1.5
3,282,220	+		HP15_3129	0.87	-0.2
3,282,480	+				-1.7
3,282,554	-				-0.8
3,282,564	-				-0.5
3,282,610	+		HP15_3130	0.10	+0.1
3,282,610	+		HP15_3130	0.10	+1.2
3,282,618	-		HP15_3130	0.11	-2.0
3,282,618	-		HP15_3130	0.11	-2.1
3,282,713	+		HP15_3130	0.21	+1.5
3,282,757	+		HP15_3130	0.25	-0.8
3,282,783	-		HP15_3130	0.28	+1.7
3,282,903	-		HP15_3130	0.40	-0.5
3,282,903	-		HP15_3130	0.40	+1.7
3,282,950	+		HP15_3130	0.44	+0.8
3,283,011	-		HP15_3130	0.50	-0.5
3,283,021	+		HP15_3130	0.51	-0.4
3,283,044	-		HP15_3130	0.54	-1.3
3,283,132	+		HP15_3130	0.62	-1.2
3,283,133	+		HP15_3130	0.62	+0.0
3,283,138	+		HP15_3130	0.63	-0.2
3,283,140	-		HP15_3130	0.63	+0.3
3,283,140	-		HP15_3130	0.63	-0.5
3,283,171	-		HP15_3130	0.66	-0.7
3,283,187	+		HP15_3130	0.68	+0.4
3,283,209	-		HP15_3130	0.70	+1.2
3,283,236	+		HP15_3130	0.73	+0.5
3,283,241	+		HP15_3130	0.73	-0.8
3,283,249	-		HP15_3130	0.74	-0.5
3,283,315	+		HP15_3130	0.81	-0.9
3,283,323	-		HP15_3130	0.81	-3.0
3,283,323	-		HP15_3130	0.81	-0.5
3,283,418	-				-0.9
3,283,418	-				+0.5
3,283,419	-				-3.2
3,283,558	+		HP15_3131	0.11	-2.2
3,283,566	-		HP15_3131	0.12	-0.1
3,283,568	+		HP15_3131	0.13	+1.9
3,283,569	+		HP15_3131	0.13	+0.2
3,283,719	+		HP15_3131	0.44	+0.8
3,283,722	+		HP15_3131	0.45	+1.8
3,283,801	+		HP15_3131	0.61	+0.3
3,283,806	+		HP15_3131	0.62	+0.8
3,283,818	+		HP15_3131	0.65	-1.1
3,283,818	+		HP15_3131	0.65	+2.7
3,283,942	+				+2.1
3,283,978	-				-0.1
3,284,008	-				+0.4
3,284,088	+				-0.5
3,284,103	+				+0.6
3,284,200	-		HP15_3132	0.13	+0.6
3,284,335	+		HP15_3132	0.23	+1.4
3,284,368	-		HP15_3132	0.26	+1.0
3,284,382	+		HP15_3132	0.27	+1.3
3,284,382	+		HP15_3132	0.27	-0.4
3,284,385	-		HP15_3132	0.27	+1.9
3,284,385	-		HP15_3132	0.27	+0.4
3,284,389	+		HP15_3132	0.27	-0.9
3,284,390	-		HP15_3132	0.27	-1.6
3,284,390	-		HP15_3132	0.27	+0.2
3,284,450	+		HP15_3132	0.32	+1.7
3,284,487	+		HP15_3132	0.34	-0.2