Strain Fitness in Marinobacter adhaerens HP15 around HP15_2228
Experiment: monoculture; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 6 |
---|---|---|---|---|---|
remove | |||||
2,344,616 | + | HP15_2227 | 0.12 | +1.8 | |
2,344,646 | + | HP15_2227 | 0.22 | -0.7 | |
2,344,679 | + | HP15_2227 | 0.33 | +0.9 | |
2,344,712 | + | HP15_2227 | 0.45 | -0.2 | |
2,344,769 | - | HP15_2227 | 0.64 | +0.2 | |
2,345,019 | + | HP15_2228 | 0.20 | -0.9 | |
2,345,042 | - | HP15_2228 | 0.25 | -1.4 | |
2,345,897 | - | HP15_2229 | 0.20 | +0.5 | |
2,346,128 | - | HP15_2229 | 0.29 | +0.1 | |
2,346,131 | + | HP15_2229 | 0.29 | -1.7 | |
2,346,247 | - | HP15_2229 | 0.34 | -0.3 |
Or see this region's nucleotide sequence