Strain Fitness in Marinobacter adhaerens HP15 around HP15_tRNA31
Experiment: monoculture; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 6 |
---|---|---|---|---|---|
remove | |||||
1,652,844 | + | HP15_1572 | 0.35 | -1.4 | |
1,652,996 | - | HP15_1572 | 0.48 | +0.8 | |
1,653,121 | + | HP15_1572 | 0.59 | +1.5 | |
1,653,121 | + | HP15_1572 | 0.59 | +1.7 | |
1,653,231 | + | HP15_1572 | 0.69 | -0.1 | |
1,653,530 | - | +0.6 | |||
1,653,582 | + | -0.7 | |||
1,653,582 | + | +1.0 | |||
1,653,590 | - | -0.5 | |||
1,653,646 | - | -2.0 | |||
1,654,562 | + | HP15_1573 | 0.21 | -0.3 | |
1,654,562 | + | HP15_1573 | 0.21 | -0.7 | |
1,654,582 | + | HP15_1573 | 0.22 | +2.0 | |
1,654,593 | + | HP15_1573 | 0.23 | -0.7 | |
1,654,593 | + | HP15_1573 | 0.23 | +2.6 | |
1,654,601 | - | HP15_1573 | 0.23 | -0.5 | |
1,654,601 | - | HP15_1573 | 0.23 | +1.0 | |
1,654,601 | - | HP15_1573 | 0.23 | +1.1 | |
1,654,730 | - | HP15_1573 | 0.31 | +0.1 |
Or see this region's nucleotide sequence