Strain Fitness in Marinobacter adhaerens HP15 around HP15_1513
Experiment: monoculture; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 6 |
---|---|---|---|---|---|
remove | |||||
1,589,753 | + | HP15_1512 | 0.62 | -1.0 | |
1,589,778 | - | HP15_1512 | 0.63 | -0.1 | |
1,589,858 | + | HP15_1512 | 0.67 | +0.5 | |
1,590,042 | - | HP15_1512 | 0.76 | -2.2 | |
1,590,429 | - | -0.2 | |||
1,590,481 | + | +0.4 | |||
1,590,491 | + | -1.4 | |||
1,590,600 | - | -1.5 | |||
1,590,601 | + | +0.3 | |||
1,590,645 | + | +0.6 | |||
1,590,653 | - | +0.1 | |||
1,590,728 | - | +2.1 | |||
1,590,741 | - | -1.3 | |||
1,590,768 | + | HP15_1513 | 0.11 | -1.4 | |
1,590,786 | - | HP15_1513 | 0.12 | +1.0 | |
1,590,795 | + | HP15_1513 | 0.13 | -0.5 | |
1,590,973 | - | HP15_1513 | 0.29 | +0.8 | |
1,591,103 | + | HP15_1513 | 0.40 | -1.0 | |
1,591,204 | + | HP15_1513 | 0.49 | -0.7 | |
1,591,255 | - | HP15_1513 | 0.54 | -1.9 | |
1,591,358 | + | HP15_1513 | 0.63 | -0.1 | |
1,591,487 | - | HP15_1513 | 0.75 | +0.1 | |
1,591,487 | - | HP15_1513 | 0.75 | -0.6 | |
1,591,550 | + | HP15_1513 | 0.80 | -1.1 | |
1,591,626 | + | HP15_1513 | 0.87 | -0.8 | |
1,591,629 | - | HP15_1513 | 0.87 | -1.6 | |
1,591,656 | - | HP15_1513 | 0.90 | -0.4 | |
1,591,674 | - | -0.3 | |||
1,591,739 | - | -0.7 |
Or see this region's nucleotide sequence