Strain Fitness in Marinobacter adhaerens HP15 around HP15_1359
Experiment: monoculture; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 6 |
---|---|---|---|---|---|
remove | |||||
1,427,525 | + | HP15_1357 | 0.49 | +0.3 | |
1,427,609 | + | HP15_1357 | 0.54 | -0.0 | |
1,427,745 | - | HP15_1357 | 0.61 | +2.5 | |
1,427,814 | + | HP15_1357 | 0.65 | -0.3 | |
1,427,831 | + | HP15_1357 | 0.66 | +1.1 | |
1,427,871 | + | HP15_1357 | 0.68 | +1.0 | |
1,427,911 | + | HP15_1357 | 0.71 | +1.0 | |
1,427,913 | - | HP15_1357 | 0.71 | -0.2 | |
1,428,151 | + | HP15_1357 | 0.84 | -0.1 | |
1,428,493 | + | +1.1 | |||
1,428,749 | + | -3.9 | |||
1,428,749 | + | -1.2 | |||
1,428,836 | - | HP15_1358 | 0.17 | -1.6 | |
1,429,023 | - | HP15_1358 | 0.44 | -2.4 | |
1,429,064 | + | HP15_1358 | 0.49 | -1.1 | |
1,429,181 | + | HP15_1358 | 0.66 | -2.3 | |
1,429,192 | + | HP15_1358 | 0.67 | -0.7 | |
1,429,192 | + | HP15_1358 | 0.67 | -1.9 | |
1,429,200 | - | HP15_1358 | 0.68 | -0.7 | |
1,429,200 | - | HP15_1358 | 0.68 | -2.1 | |
1,429,317 | + | HP15_1358 | 0.85 | -2.0 | |
1,429,334 | - | HP15_1358 | 0.87 | +1.5 | |
1,429,334 | - | HP15_1358 | 0.87 | -4.2 | |
1,429,409 | - | -1.8 |
Or see this region's nucleotide sequence