Strain Fitness in Marinobacter adhaerens HP15 around HP15_1268
Experiment: monoculture; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 6 |
---|---|---|---|---|---|
remove | |||||
1,325,776 | + | HP15_1266 | 0.18 | +0.8 | |
1,325,783 | + | HP15_1266 | 0.19 | +0.5 | |
1,325,783 | + | HP15_1266 | 0.19 | +0.3 | |
1,325,824 | + | HP15_1266 | 0.26 | +1.2 | |
1,325,836 | + | HP15_1266 | 0.28 | -0.3 | |
1,325,859 | - | HP15_1266 | 0.31 | -0.0 | |
1,325,975 | - | HP15_1266 | 0.50 | +1.3 | |
1,326,219 | - | -0.1 | |||
1,326,231 | - | +0.2 | |||
1,326,323 | - | +2.8 | |||
1,326,443 | + | HP15_1267 | 0.35 | +1.6 | |
1,326,448 | + | HP15_1267 | 0.37 | -2.1 | |
1,326,451 | - | HP15_1267 | 0.38 | +0.1 | |
1,326,451 | - | HP15_1267 | 0.38 | +2.3 | |
1,326,453 | + | HP15_1267 | 0.38 | +2.0 | |
1,326,462 | - | HP15_1267 | 0.41 | +0.1 | |
1,326,532 | + | HP15_1267 | 0.60 | +0.2 | |
1,326,742 | + | +0.1 | |||
1,326,758 | + | +0.9 | |||
1,326,776 | - | -0.8 | |||
1,326,972 | + | HP15_1268 | 0.50 | +0.6 | |
1,327,049 | + | HP15_1268 | 0.66 | -0.1 | |
1,327,071 | + | HP15_1268 | 0.71 | -0.4 |
Or see this region's nucleotide sequence