Strain Fitness in Marinobacter adhaerens HP15 around HP15_1238

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
1,287,774	-		HP15_1236	0.88	+2.0
1,287,890	+				+2.7
1,287,891	-				+1.7
1,287,900	+				-0.2
1,287,900	+				+1.2
1,287,900	+				-0.1
1,287,974	-				+1.1
1,287,985	-				+0.3
1,288,021	+				+1.7
1,288,256	+		HP15_1237	0.11	-1.4
1,288,290	+		HP15_1237	0.18	-1.0
1,288,402	+		HP15_1237	0.42	-0.4
1,288,475	+		HP15_1237	0.57	-0.1
1,288,477	+		HP15_1237	0.58	-0.4
1,288,483	-		HP15_1237	0.59	-2.0
1,288,492	-		HP15_1237	0.61	-0.7
1,288,502	-		HP15_1237	0.63	-1.2
1,288,516	+		HP15_1237	0.66	-0.6
1,288,516	+		HP15_1237	0.66	-0.1
1,288,524	-		HP15_1237	0.68	+0.8
1,288,554	+		HP15_1237	0.74	+1.2
1,288,608	-		HP15_1237	0.86	+2.9
1,288,865	+		HP15_1238	0.11	+0.2
1,288,873	-		HP15_1238	0.12	-0.1
1,288,994	+		HP15_1238	0.20	-0.0
1,288,999	+		HP15_1238	0.20	+1.2
1,289,085	-		HP15_1238	0.26	-0.4
1,289,240	-		HP15_1238	0.36	-0.8
1,289,244	-		HP15_1238	0.36	-0.1
1,289,508	-		HP15_1238	0.53	-3.2
1,289,508	-		HP15_1238	0.53	-1.1
1,289,553	+		HP15_1238	0.56	-0.3
1,289,580	-		HP15_1238	0.58	-0.1
1,289,672	+		HP15_1238	0.64	+1.3
1,289,672	+		HP15_1238	0.64	-0.3
1,289,738	-		HP15_1238	0.69	-0.1
1,289,740	-		HP15_1238	0.69	+0.4
1,289,796	-		HP15_1238	0.72	-2.5
1,289,796	-		HP15_1238	0.72	+0.8
1,289,877	+		HP15_1238	0.78	-0.1
1,289,880	-		HP15_1238	0.78	+1.8
1,289,972	+		HP15_1238	0.84	+1.8
1,289,972	+		HP15_1238	0.84	+1.8
1,289,980	-		HP15_1238	0.84	-0.5
1,290,112	+				-1.0
1,290,112	+				+0.7
1,290,112	+				+1.2
1,290,112	+				-1.1
1,290,120	-				-1.3
1,290,120	-				+0.6
1,290,120	-				+2.8
1,290,120	-				+1.9
1,290,120	-				-1.8
1,290,120	-				-1.2
1,290,151	-				+1.2
1,290,261	-				+1.6
1,290,268	+				-1.4
1,290,280	-				-0.0
1,290,285	-				-0.2
1,290,315	-				+2.8
1,290,336	+				-0.1
1,290,403	+				+0.5
1,290,416	-				-2.0