Strain Fitness in Marinobacter adhaerens HP15 around HP15_743

Experiment: monoculture; Experiment C, time point 5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_742 and HP15_743 are separated by 248 nucleotidesHP15_743 and HP15_744 are separated by 13 nucleotidesHP15_744 and HP15_745 are separated by 17 nucleotides HP15_742: HP15_742 - acetyl-CoA hydrolase, at 750,020 to 752,230 _742 HP15_743: HP15_743 - hypothetical protein, at 752,479 to 752,604 _743 HP15_744: HP15_744 - phospholipid/glycerol acyltransferase, at 752,618 to 753,478 _744 HP15_745: HP15_745 - conserved hypothetical protein, at 753,496 to 754,257 _745 Position (kb) 752 753Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 751.504 kb on + strand, within HP15_742at 751.534 kb on + strand, within HP15_742at 751.539 kb on + strand, within HP15_742at 751.547 kb on - strand, within HP15_742at 751.559 kb on - strand, within HP15_742at 751.587 kb on - strand, within HP15_742at 751.620 kb on + strand, within HP15_742at 751.657 kb on + strand, within HP15_742at 751.660 kb on - strand, within HP15_742at 751.665 kb on - strand, within HP15_742at 751.669 kb on + strand, within HP15_742at 751.677 kb on - strand, within HP15_742at 751.677 kb on - strand, within HP15_742at 751.706 kb on - strand, within HP15_742at 751.760 kb on + strand, within HP15_742at 751.797 kb on + strand, within HP15_742at 751.901 kb on - strand, within HP15_742at 752.025 kb on - strandat 752.136 kb on - strandat 752.144 kb on - strandat 752.189 kb on - strandat 752.218 kb on + strandat 752.234 kb on - strandat 752.252 kb on - strandat 752.351 kb on - strandat 752.458 kb on - strandat 752.458 kb on - strandat 752.492 kb on - strand, within HP15_743at 752.499 kb on - strand, within HP15_743at 752.667 kb on + strandat 752.694 kb on + strandat 752.694 kb on + strandat 752.771 kb on - strand, within HP15_744at 752.775 kb on - strand, within HP15_744at 752.821 kb on - strand, within HP15_744at 752.830 kb on + strandat 752.835 kb on + strand, within HP15_744at 752.985 kb on + strand, within HP15_744at 752.993 kb on - strand, within HP15_744at 753.022 kb on + strand, within HP15_744at 753.058 kb on - strand, within HP15_744at 753.100 kb on - strand, within HP15_744at 753.107 kb on + strand, within HP15_744at 753.107 kb on + strand, within HP15_744at 753.110 kb on - strand, within HP15_744at 753.115 kb on - strand, within HP15_744at 753.115 kb on - strand, within HP15_744at 753.219 kb on - strand, within HP15_744at 753.300 kb on + strand, within HP15_744at 753.300 kb on + strand, within HP15_744at 753.347 kb on + strand, within HP15_744at 753.412 kb on + strandat 753.560 kb on + strandat 753.575 kb on - strand, within HP15_745

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Per-strain Table

Position Strand Gene LocusTag Fraction monoculture; Experiment C, time point 5
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751,504 + HP15_742 0.67 -0.3
751,534 + HP15_742 0.68 +0.5
751,539 + HP15_742 0.69 +0.7
751,547 - HP15_742 0.69 -3.2
751,559 - HP15_742 0.70 -0.7
751,587 - HP15_742 0.71 -0.7
751,620 + HP15_742 0.72 -0.7
751,657 + HP15_742 0.74 +0.9
751,660 - HP15_742 0.74 -0.7
751,665 - HP15_742 0.74 -0.8
751,669 + HP15_742 0.75 +0.9
751,677 - HP15_742 0.75 +0.4
751,677 - HP15_742 0.75 -0.5
751,706 - HP15_742 0.76 +0.7
751,760 + HP15_742 0.79 +1.3
751,797 + HP15_742 0.80 +1.0
751,901 - HP15_742 0.85 -2.2
752,025 - +1.3
752,136 - -0.0
752,144 - -1.7
752,189 - +0.9
752,218 + -0.6
752,234 - -0.8
752,252 - -0.6
752,351 - -0.6
752,458 - -0.5
752,458 - +1.6
752,492 - HP15_743 0.10 +0.7
752,499 - HP15_743 0.16 -0.6
752,667 + -0.4
752,694 + -1.4
752,694 + -1.0
752,771 - HP15_744 0.18 -0.8
752,775 - HP15_744 0.18 +2.2
752,821 - HP15_744 0.24 +0.0
752,830 + -0.6
752,835 + HP15_744 0.25 -1.0
752,985 + HP15_744 0.43 -2.7
752,993 - HP15_744 0.44 +1.5
753,022 + HP15_744 0.47 +2.1
753,058 - HP15_744 0.51 +0.7
753,100 - HP15_744 0.56 -0.8
753,107 + HP15_744 0.57 +0.2
753,107 + HP15_744 0.57 -1.4
753,110 - HP15_744 0.57 +1.5
753,115 - HP15_744 0.58 -0.7
753,115 - HP15_744 0.58 -0.7
753,219 - HP15_744 0.70 -1.6
753,300 + HP15_744 0.79 -0.4
753,300 + HP15_744 0.79 -0.9
753,347 + HP15_744 0.85 -0.4
753,412 + -1.3
753,560 + -0.8
753,575 - HP15_745 0.10 +0.1

Or see this region's nucleotide sequence