Strain Fitness in Marinobacter adhaerens HP15 around HP15_4107

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,338,833	+				+1.4
4,338,903	+		HP15_4105	0.11	+1.2
4,338,974	-		HP15_4105	0.34	-0.8
4,339,088	+		HP15_4105	0.72	-1.2
4,339,164	+				-0.4
4,339,220	-				-0.2
4,339,376	+		HP15_4106	0.45	-0.5
4,339,388	-		HP15_4106	0.48	-0.2
4,339,481	+		HP15_4106	0.72	+0.9
4,339,489	-		HP15_4106	0.74	-0.9
4,339,569	-				+1.6
4,339,569	-				-0.4
4,339,574	-				+0.8
4,339,651	-				+0.4
4,339,707	+				+2.4
4,339,715	-				+0.3
4,339,715	-				+0.4
4,339,720	-				-0.3
4,339,752	-				+0.2
4,339,814	+				-2.3
4,339,853	+				-0.6
4,339,861	-				-1.2
4,339,910	+		HP15_4107	0.15	-0.7
4,339,910	+		HP15_4107	0.15	+0.8
4,339,918	-		HP15_4107	0.16	+0.5
4,339,944	+		HP15_4107	0.19	+1.4
4,339,952	-		HP15_4107	0.20	+1.4
4,340,003	+		HP15_4107	0.27	+1.0
4,340,105	+		HP15_4107	0.39	+1.8
4,340,151	+		HP15_4107	0.45	+1.7
4,340,311	+		HP15_4107	0.64	-0.3
4,340,431	+		HP15_4107	0.79	+0.4
4,340,442	-		HP15_4107	0.81	+0.3
4,340,502	+		HP15_4107	0.88	-1.0
4,340,510	-		HP15_4107	0.89	+2.0
4,340,562	-				-0.6
4,340,587	-				-0.1
4,340,589	+				-2.3
4,340,613	+				-1.8
4,340,613	+				+0.3
4,340,613	+				-0.7
4,340,613	+				-1.9
4,340,613	+				+1.5
4,340,621	-				-0.6
4,340,621	-				+0.3
4,340,621	-				-0.1
4,340,661	-				-0.6
4,340,721	+		HP15_4108	0.13	-0.3
4,340,729	-		HP15_4108	0.13	-0.5
4,340,887	-		HP15_4108	0.29	-1.0
4,340,918	+		HP15_4108	0.32	+0.3
4,340,926	-		HP15_4108	0.33	-0.8
4,340,926	-		HP15_4108	0.33	+1.3
4,341,006	-		HP15_4108	0.41	+0.9
4,341,032	-		HP15_4108	0.44	-0.6
4,341,066	-		HP15_4108	0.47	-0.0
4,341,077	+		HP15_4108	0.48	-1.6
4,341,077	+		HP15_4108	0.48	-0.0
4,341,129	-		HP15_4108	0.54	+0.5
4,341,376	-		HP15_4108	0.79	-1.7
4,341,556	+				-1.0
4,341,589	+				+1.8