Strain Fitness in Marinobacter adhaerens HP15 around HP15_4001

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,233,289	+		HP15_4000	0.33	+0.9
4,233,322	-		HP15_4000	0.36	-0.3
4,233,322	-		HP15_4000	0.36	+1.5
4,233,527	+		HP15_4000	0.55	-0.9
4,233,562	-		HP15_4000	0.59	-0.9
4,233,666	-		HP15_4000	0.69	-0.3
4,233,716	+		HP15_4000	0.73	-0.7
4,233,934	+				-0.7
4,234,017	-				+1.1
4,234,287	+		HP15_4001	0.38	-0.8
4,234,287	+		HP15_4001	0.38	-0.2
4,234,297	-		HP15_4001	0.40	+0.4
4,234,368	+		HP15_4001	0.56	-1.0
4,234,574	-				-0.2
4,234,622	+				+0.2
4,234,630	-				-0.4
4,234,666	-				+0.9
4,234,811	-				+1.2
4,234,834	-				-0.3
4,235,033	+		HP15_4002	0.25	-1.6
4,235,067	+		HP15_4002	0.28	+0.5
4,235,085	-		HP15_4002	0.30	-2.0
4,235,115	-		HP15_4002	0.32	-1.7
4,235,205	+		HP15_4002	0.39	+0.5
4,235,236	+		HP15_4002	0.42	+1.4
4,235,262	-		HP15_4002	0.44	+0.1
4,235,277	-		HP15_4002	0.45	-1.1
4,235,326	+		HP15_4002	0.49	+1.2
4,235,326	+		HP15_4002	0.49	-0.3
4,235,453	+		HP15_4002	0.59	-3.5
4,235,470	+		HP15_4002	0.61	-1.4
4,235,478	-		HP15_4002	0.61	-2.8