Strain Fitness in Marinobacter adhaerens HP15 around HP15_3873

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,098,614	+		HP15_3872	0.25	-0.7
4,098,644	+		HP15_3872	0.28	+0.3
4,098,668	+		HP15_3872	0.31	+0.2
4,098,679	+		HP15_3872	0.32	+0.0
4,098,714	+		HP15_3872	0.36	+0.8
4,098,724	-		HP15_3872	0.37	-0.4
4,098,734	-		HP15_3872	0.38	+0.4
4,098,896	-		HP15_3872	0.56	-0.4
4,098,991	+		HP15_3872	0.66	+1.0
4,098,991	+		HP15_3872	0.66	-0.0
4,098,991	+		HP15_3872	0.66	-0.4
4,099,009	-		HP15_3872	0.68	+1.5
4,099,081	-		HP15_3872	0.76	-0.2
4,099,155	-		HP15_3872	0.85	-0.2
4,099,165	-		HP15_3872	0.86	-0.1
4,099,321	-				+1.4
4,099,349	-				-0.6
4,099,597	+				-0.2
4,099,605	-				+0.4
4,099,623	+				-0.1
4,099,628	-				+0.5
4,099,644	-		HP15_3873	0.11	+0.3
4,099,646	+		HP15_3873	0.11	+1.4
4,099,651	+		HP15_3873	0.12	-0.6
4,099,654	-		HP15_3873	0.12	-0.2
4,099,668	+		HP15_3873	0.13	+0.3
4,099,676	-		HP15_3873	0.14	-1.4
4,099,799	+		HP15_3873	0.25	-1.9
4,099,799	+		HP15_3873	0.25	-0.2
4,099,799	+		HP15_3873	0.25	+1.7
4,099,807	-		HP15_3873	0.26	-1.2
4,099,823	+		HP15_3873	0.27	-2.2
4,099,831	-		HP15_3873	0.28	+1.2
4,099,898	-		HP15_3873	0.34	+0.9
4,099,931	-		HP15_3873	0.37	+1.1
4,099,931	-		HP15_3873	0.37	+1.2
4,099,964	-		HP15_3873	0.40	-0.1
4,099,999	-		HP15_3873	0.43	+0.0
4,100,097	+		HP15_3873	0.52	-1.0
4,100,173	-		HP15_3873	0.59	-0.2
4,100,221	+		HP15_3873	0.63	+0.8
4,100,241	+		HP15_3873	0.65	-0.4
4,100,295	-		HP15_3873	0.70	-2.1
4,100,300	-		HP15_3873	0.70	-0.5
4,100,486	-		HP15_3873	0.87	+0.5
4,100,500	-		HP15_3873	0.89	-3.2
4,100,750	+				+1.4
4,100,758	-				-0.8
4,100,765	-				-1.8
4,100,765	-				-0.3
4,100,925	+				-1.3
4,100,925	+				-0.4
4,101,183	+		HP15_3874	0.46	-0.6
4,101,183	+		HP15_3874	0.46	+0.8
4,101,201	+		HP15_3874	0.51	-0.0
4,101,241	+		HP15_3874	0.61	+0.6
4,101,249	-		HP15_3874	0.62	+1.9
4,101,259	-		HP15_3874	0.65	+0.9
4,101,269	+		HP15_3874	0.67	-1.1
4,101,277	-		HP15_3874	0.69	+1.1
4,101,449	+				+0.3
4,101,457	-				+0.9
4,101,483	-				+0.1
4,101,541	+				-0.8
4,101,542	-				-1.0