Strain Fitness in Marinobacter adhaerens HP15 around HP15_3854

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,079,312	-		HP15_3853	0.13	+0.2
4,079,339	+		HP15_3853	0.16	+1.7
4,079,385	+		HP15_3853	0.21	+0.1
4,079,417	+		HP15_3853	0.24	+0.4
4,079,684	-		HP15_3853	0.52	-2.6
4,079,693	-		HP15_3853	0.53	-0.9
4,079,711	-		HP15_3853	0.55	-0.7
4,079,798	-		HP15_3853	0.64	-0.3
4,079,826	+		HP15_3853	0.67	+0.2
4,079,826	+		HP15_3853	0.67	+2.0
4,079,829	-		HP15_3853	0.68	-0.2
4,079,829	-		HP15_3853	0.68	+1.1
4,079,829	-		HP15_3853	0.68	-2.7
4,079,834	-		HP15_3853	0.68	+0.5
4,079,834	-		HP15_3853	0.68	-1.1
4,079,851	-		HP15_3853	0.70	-0.1
4,079,861	-		HP15_3853	0.71	-1.0
4,079,922	+		HP15_3853	0.77	+0.0
4,079,922	+		HP15_3853	0.77	+0.0
4,079,922	+		HP15_3853	0.77	+1.0
4,079,925	-		HP15_3853	0.78	+1.3
4,080,004	+		HP15_3853	0.86	+1.0
4,080,035	+		HP15_3853	0.89	-0.7
4,080,043	-				+1.2
4,080,298	+				-1.4
4,080,412	+		HP15_3854	0.24	-1.3
4,080,505	-		HP15_3854	0.42	-3.7
4,080,667	-		HP15_3854	0.74	-2.3
4,080,667	-		HP15_3854	0.74	-1.9
4,080,816	+				-0.5
4,080,818	-				-0.4
4,080,818	-				+1.6
4,080,909	+				+2.1
4,080,917	-				+0.4
4,080,924	+				+0.3
4,080,950	-				-0.8
4,080,993	+				-0.5
4,080,999	+				-0.4
4,081,047	+				-0.5
4,081,050	-				-1.0
4,081,069	+				-3.7
4,081,093	+				+1.0
4,081,095	+				-0.8
4,081,101	-				+0.0
4,081,103	-				-0.3
4,081,222	-		HP15_3855	0.17	+2.4
4,081,283	+		HP15_3855	0.22	+1.2
4,081,283	+		HP15_3855	0.22	+1.9
4,081,341	-		HP15_3855	0.26	+1.3
4,081,348	-		HP15_3855	0.27	+0.2
4,081,373	-		HP15_3855	0.29	-0.4
4,081,421	-		HP15_3855	0.32	-1.7
4,081,433	-		HP15_3855	0.33	-1.0
4,081,483	+		HP15_3855	0.37	-0.9
4,081,483	+		HP15_3855	0.37	+0.9
4,081,491	-		HP15_3855	0.38	-0.9
4,081,491	-		HP15_3855	0.38	-0.4
4,081,491	-		HP15_3855	0.38	-1.0
4,081,491	-		HP15_3855	0.38	-1.1
4,081,491	-		HP15_3855	0.38	+1.4
4,081,491	-		HP15_3855	0.38	+0.2
4,081,491	-		HP15_3855	0.38	+1.8
4,081,534	+		HP15_3855	0.41	+0.5
4,081,542	-		HP15_3855	0.42	-0.8
4,081,542	-		HP15_3855	0.42	-0.2
4,081,659	+		HP15_3855	0.51	+0.0
4,081,667	-		HP15_3855	0.52	-0.3
4,081,688	-		HP15_3855	0.54	+0.8
4,081,712	-		HP15_3855	0.55	-0.2
4,081,792	-		HP15_3855	0.62	-0.2