Strain Fitness in Marinobacter adhaerens HP15 around HP15_3825

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,050,470	+		HP15_3824	0.21	-1.6
4,050,478	-		HP15_3824	0.22	-1.9
4,050,503	+		HP15_3824	0.24	-1.3
4,050,511	-		HP15_3824	0.25	-1.7
4,050,661	-		HP15_3824	0.39	-0.3
4,050,693	+		HP15_3824	0.42	+0.1
4,050,693	+		HP15_3824	0.42	+1.6
4,050,763	-		HP15_3824	0.49	-1.3
4,050,775	-		HP15_3824	0.50	-0.5
4,050,846	-		HP15_3824	0.57	-0.5
4,050,980	+		HP15_3824	0.70	-1.2
4,050,998	-		HP15_3824	0.71	-0.5
4,051,090	+		HP15_3824	0.80	-1.2
4,051,109	+		HP15_3824	0.82	-1.5
4,051,278	+				-1.7
4,051,328	+				-1.1
4,051,328	+				-0.4
4,051,328	+				+1.9
4,051,328	+				-0.2
4,051,328	+				-1.4
4,051,336	-				-0.6
4,051,336	-				-0.8
4,051,336	-				-0.9
4,051,336	-				+1.2
4,051,336	-				-0.7
4,051,396	-				+1.7
4,051,417	-				-0.3
4,051,461	+				-0.5
4,051,469	+				+0.0
4,051,531	-				-0.4
4,051,557	+				-0.2
4,051,652	+		HP15_3825	0.16	-0.8
4,051,740	-		HP15_3825	0.22	+1.1
4,051,872	-		HP15_3825	0.31	-2.0
4,051,966	-		HP15_3825	0.37	-0.8
4,052,018	-		HP15_3825	0.41	-0.7
4,052,045	+		HP15_3825	0.42	-0.3
4,052,160	-		HP15_3825	0.50	-0.6
4,052,160	-		HP15_3825	0.50	-0.2
4,052,167	-		HP15_3825	0.51	-0.5
4,052,213	+		HP15_3825	0.54	-2.1
4,052,344	+		HP15_3825	0.63	+1.5
4,052,373	-		HP15_3825	0.65	-0.3
4,052,434	-		HP15_3825	0.69	+0.5
4,052,438	+		HP15_3825	0.69	+1.1
4,052,478	-		HP15_3825	0.72	-0.5
4,052,515	+		HP15_3825	0.74	-0.3
4,052,550	+		HP15_3825	0.77	+0.2
4,052,623	-		HP15_3825	0.82	-0.7
4,052,708	+		HP15_3825	0.87	+0.2
4,053,067	+		HP15_3826	0.17	-0.6
4,053,070	-		HP15_3826	0.18	-1.2
4,053,115	-		HP15_3826	0.23	-0.2
4,053,467	-		HP15_3826	0.67	-0.6
4,053,586	+		HP15_3826	0.82	-0.6
4,053,853	+		HP15_3827	0.29	-1.4
4,053,874	+		HP15_3827	0.36	+0.4