Strain Fitness in Marinobacter adhaerens HP15 around HP15_3781

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,000,089	+				+0.1
4,000,105	+		HP15_3780	0.10	-0.6
4,000,113	-		HP15_3780	0.11	-0.3
4,000,113	-		HP15_3780	0.11	+1.7
4,000,129	-		HP15_3780	0.13	-0.6
4,000,184	-		HP15_3780	0.19	-0.9
4,000,204	+		HP15_3780	0.21	+0.1
4,000,326	+		HP15_3780	0.34	-0.9
4,000,400	+		HP15_3780	0.42	+1.3
4,000,439	+		HP15_3780	0.46	-1.1
4,000,448	-		HP15_3780	0.47	-2.0
4,000,529	+		HP15_3780	0.56	+0.6
4,000,552	-		HP15_3780	0.59	+0.1
4,000,619	-		HP15_3780	0.66	-0.5
4,000,790	-		HP15_3780	0.84	-0.4
4,000,796	-		HP15_3780	0.85	+2.2
4,000,815	+		HP15_3780	0.87	-0.3
4,000,833	-		HP15_3780	0.89	+0.2
4,000,860	+				+0.9
4,000,947	-				+0.6
4,001,112	-				-2.8
4,001,122	-				-0.8
4,001,122	-				-0.3
4,001,144	-				+0.0
4,001,193	-		HP15_3781	0.17	-3.0
4,001,261	+		HP15_3781	0.27	-3.2
4,001,305	+		HP15_3781	0.33	-0.7
4,001,305	+		HP15_3781	0.33	-1.6
4,001,313	-		HP15_3781	0.34	-2.6
4,001,370	+		HP15_3781	0.43	-2.9
4,001,438	+		HP15_3781	0.53	+1.3
4,001,438	+				-0.2
4,001,498	-		HP15_3781	0.62	-2.8
4,001,526	+		HP15_3781	0.66	-3.0
4,001,526	+		HP15_3781	0.66	-2.2
4,001,534	-		HP15_3781	0.67	-1.3
4,001,534	-		HP15_3781	0.67	-1.7
4,001,534	-		HP15_3781	0.67	-0.4
4,001,747	+				-2.3
4,001,747	+				-0.4
4,001,815	+				-0.4
4,002,093	+		HP15_3782	0.13	-0.5
4,002,120	-		HP15_3782	0.14	-0.4
4,002,125	-		HP15_3782	0.14	+1.5
4,002,142	-		HP15_3782	0.15	+1.3
4,002,237	-		HP15_3782	0.19	+0.4
4,002,246	+		HP15_3782	0.19	-0.1
4,002,252	-		HP15_3782	0.19	-0.5
4,002,252	-		HP15_3782	0.19	+0.2
4,002,377	-		HP15_3782	0.24	+1.7
4,002,407	+		HP15_3782	0.25	+0.7
4,002,447	+		HP15_3782	0.27	-0.4
4,002,460	+		HP15_3782	0.28	+1.3
4,002,468	-		HP15_3782	0.28	-0.0
4,002,470	+		HP15_3782	0.28	+0.2
4,002,470	+		HP15_3782	0.28	-0.3
4,002,473	-		HP15_3782	0.28	+0.1
4,002,478	-		HP15_3782	0.28	-0.4
4,002,524	-		HP15_3782	0.30	+2.0
4,002,529	-		HP15_3782	0.30	+0.4
4,002,562	+		HP15_3782	0.32	-1.2
4,002,577	+		HP15_3782	0.32	-0.6
4,002,595	+		HP15_3782	0.33	+0.4
4,002,611	+		HP15_3782	0.34	+0.5
4,002,619	-		HP15_3782	0.34	+0.2
4,002,621	+		HP15_3782	0.34	-0.3
4,002,730	+		HP15_3782	0.38	-0.5
4,002,737	-		HP15_3782	0.39	-0.9