Strain Fitness in Marinobacter adhaerens HP15 around HP15_3384
Experiment: monoculture; Experiment C, time point 5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 5 |
---|---|---|---|---|---|
remove | |||||
3,552,801 | - | +0.2 | |||
3,552,849 | - | -1.8 | |||
3,552,979 | - | HP15_3384 | 0.22 | +1.3 | |
3,552,980 | - | HP15_3384 | 0.22 | -1.6 | |
3,553,086 | - | HP15_3384 | 0.51 | -1.0 | |
3,553,151 | + | HP15_3384 | 0.69 | -0.6 | |
3,553,220 | + | HP15_3384 | 0.88 | -1.4 | |
3,553,220 | + | HP15_3384 | 0.88 | -1.1 | |
3,553,228 | - | -1.6 | |||
3,553,228 | - | -0.5 | |||
3,553,278 | + | +1.4 | |||
3,553,320 | + | -0.5 | |||
3,553,361 | - | -0.7 | |||
3,553,398 | + | -0.4 | |||
3,553,410 | + | -0.4 | |||
3,554,164 | + | +0.1 | |||
3,554,172 | - | -0.6 |
Or see this region's nucleotide sequence