Strain Fitness in Marinobacter adhaerens HP15 around HP15_2015

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,115,432	+		HP15_2014	0.47	+1.4
2,115,546	+		HP15_2014	0.56	+1.0
2,115,554	-		HP15_2014	0.56	+1.5
2,115,594	-		HP15_2014	0.59	-0.6
2,115,649	-		HP15_2014	0.63	-1.6
2,115,702	+		HP15_2014	0.67	+1.5
2,115,726	-		HP15_2014	0.68	-0.6
2,115,862	-		HP15_2014	0.78	+1.4
2,115,885	-		HP15_2014	0.80	-0.0
2,115,885	-		HP15_2014	0.80	+0.1
2,115,904	+		HP15_2014	0.81	+1.6
2,115,904	+		HP15_2014	0.81	+0.1
2,115,912	-		HP15_2014	0.82	+1.1
2,115,937	+		HP15_2014	0.84	-1.6
2,116,031	+				-0.1
2,116,117	+				+1.3
2,116,125	-				+0.5
2,116,154	+				-2.2
2,116,162	-				-1.7
2,116,265	+				+0.1
2,116,342	+				+1.1
2,116,547	+		HP15_2015	0.28	-1.1
2,116,559	+		HP15_2015	0.29	-1.9
2,116,567	-		HP15_2015	0.30	-0.3
2,116,615	+		HP15_2015	0.35	+1.6
2,116,631	+		HP15_2015	0.37	+1.6
2,116,639	-		HP15_2015	0.38	-1.6
2,116,696	-		HP15_2015	0.44	-0.2
2,116,697	-		HP15_2015	0.44	+3.5
2,116,703	+		HP15_2015	0.45	+2.1
2,116,785	+		HP15_2015	0.54	+0.0
2,116,797	-		HP15_2015	0.56	+2.3
2,116,797	-		HP15_2015	0.56	-0.6
2,116,848	+		HP15_2015	0.61	-0.1
2,116,975	+		HP15_2015	0.75	+0.0
2,117,109	-				-0.5
2,117,127	+				+0.2
2,117,300	+				-0.1
2,117,307	+				+0.2
2,117,307	+				-0.9
2,117,308	-				+1.7
2,117,308	-				-0.8
2,117,322	+				-2.2
2,117,363	-				+1.4
2,117,377	-				+1.6
2,117,421	-		HP15_2016	0.15	-0.5
2,117,801	-		HP15_2016	0.59	+1.8
2,117,801	-		HP15_2016	0.59	-0.3
2,117,857	+		HP15_2016	0.66	-1.1
2,117,944	-		HP15_2016	0.76	-0.7
2,118,026	+		HP15_2016	0.86	-2.4
2,118,092	+				+2.5